| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1689 |
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| Symbol | |
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| ID | 8019342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1799230 |
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| End bp | 1799751 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644830471 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_002981644 |
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| Protein GI | 241663284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.438523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC ATCGCCCTCC CATCCGCCCC AACGCACAAC TGCTGCCGAC ACTCTTTGAC
CGGTTGCGCG ACGCTGCACC ACAGCGGCAA ACGGAAGCCG CCAACGAATA CACGGTCACG
CGCACGCAGA TGCGCGAGAT CCTCCAGCGC GATCTGACGT ACCTGCTCAA CACCACGAAT
CGCGAAGACG AGATCGATCG GACACGCTAC CCAGAGGCGG CAAGTTCCAC CATCAACTAT
GGGGTACCGC CGGTGGCCGG CAGCTATCTG TCGGAACACA AGTGGACCGA CATCGTCAAG
ATCGTGCGCC GCGCGATTCT GGATTTCGAG CCACGGCTCA TTCCTGGCTC GCTGGAAGTC
AAGCCGTTGC TCAAGGAAGA CGCGCCAACT CGCTACAACG TGCTGCTGTT CGAGATCAGC
GGGCTGATCC ACATGGACCC GTACCCGATG GCCTTTACCG CGCAGAGCTC GCTCGATCTG
GAAACTGGCC ACATGAACGT TCGCTCACTT CACGCCCACT GA
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| Protein sequence | MSEHRPPIRP NAQLLPTLFD RLRDAAPQRQ TEAANEYTVT RTQMREILQR DLTYLLNTTN
REDEIDRTRY PEAASSTINY GVPPVAGSYL SEHKWTDIVK IVRRAILDFE PRLIPGSLEV
KPLLKEDAPT RYNVLLFEIS GLIHMDPYPM AFTAQSSLDL ETGHMNVRSL HAH
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