Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1666 |
Symbol | |
ID | 8019318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1769778 |
End bp | 1770170 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830447 |
Product | hypothetical protein |
Protein accession | YP_002981621 |
Protein GI | 241663261 |
COG category | [S] Function unknown |
COG ID | [COG3308] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.361842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00498054 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCCA CCGACAACGC CGTCACCGAA TCCCGAACAC TGGCTCTGCT GAGTGCAGGC AGCCTCATCG CATTGATCGT CCTGTGTGCC GCGTGGGAGC TGTGGCTCGC GCCCGTGCGC CCGGGCGGCT CGTGGCTGGC GCTCAAGGCG CTGCTGCTGG CATGGCCGCT ACCTGGCGTG CTGCGCAAGA ACCGCTACAC GATGCAATGG GCGTCGATGT TCATCCTGCT GTTCTTTACC GAAGGCATCG TGCGGGCAAC ATCGGACGTT GGGCCTTCGC GCTCGCTGGC CTGGGGCGAG GTAGCCCTCA GCGTGGTGTT CTTCACGGCA ACCATCTTCT ATCTGCGCCC GTTCAAGCGT GCAGCCAAAG CCCGCCCCAG CCAAAGCACC TGA
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Protein sequence | MNPTDNAVTE SRTLALLSAG SLIALIVLCA AWELWLAPVR PGGSWLALKA LLLAWPLPGV LRKNRYTMQW ASMFILLFFT EGIVRATSDV GPSRSLAWGE VALSVVFFTA TIFYLRPFKR AAKARPSQST
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