Gene Rpic12D_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1604 
Symbol 
ID8019254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1704015 
End bp1704329 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID644830384 
ProductTM2 domain containing protein 
Protein accessionYP_002981560 
Protein GI241663200 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.10102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.345673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA CCGCCCGCGA AATCATGCTG TACGACGCCC AGAAGAAAAG TTCGGGCGTG 
GCTTACCTGT GGTGGTTTTT GCTGGGCTTC CTGGGGGCGC ATCGCTTCTA CCTGAAGCGT
CTGGGCAGCG GTATCGCGCA GGCCATCGCC AACATCGGCG GCACATGGCT CGCATTTCGT
GACATGGGTA ACACTGCAGG CTGGGTGCTA GCGGTTATCG GCGGGCTGTG GGTGCTGGTG
GACGTGTTCC TGATTCCCGG AATGGTCCGG GCCAACAACA CGGCGCTTGC CGAGCAGCTT
TCGACCACGC CCTGA
 
Protein sequence
MNQTAREIML YDAQKKSSGV AYLWWFLLGF LGAHRFYLKR LGSGIAQAIA NIGGTWLAFR 
DMGNTAGWVL AVIGGLWVLV DVFLIPGMVR ANNTALAEQL STTP