| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1588 |
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| Symbol | |
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| ID | 8019236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1685996 |
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| End bp | 1687789 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830366 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_002981544 |
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| Protein GI | 241663184 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0109176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGC GTCAATCGAC ATCATCCAAA GCATCTAGCG CCCACACTCA AGCTCCCTGG
CCGGGCTTGT CGGACCCTAC GCAGTGGGCA GAGCAGTTCA AGCAATGGCA AGCCTTTGCG
GGCGCCTTCG CGCAACCCGG TGCAGCGGCG CCTGGTCTTG GCCAGTTCAA CGGCGCAGCG
ATGGGTGAGG GTGCGGCTCC GTTCGCACTG ATTCCGCACG AGCGGCTGGC CGAAATCCAG
CAGAAGTATC TTGAAGAATG GCTTCAGATC TGGCGCCACA TGAGCACCGG CGAAAGCGCA
GAAGCCGTGG CTCCGTCTGA TCGTCGTTTC TCGAACGATG CCTGGCGCAA GAGTCCGCTC
TATGGCTACG CCGCCGCGTT CTACATGCTG AACGCCCGCA CGTTGATGGA AATGGCCGAT
GCAGTCCAGG CGGACGTCAA GACCCGCGAG CGCGTGCGCT TTGCCGTTTC GCAATGGACA
GCGGCCATGT CGCCGTCCAA CTTCCTTGCG ACCAACCCGG AAGCGCAGAA ACAACTGATT
GAGTCGCGTG GCGAATCCCT GCGCACCGGT ATCCTGAACA TGCTGCAGGA CATGGAGCGC
GGAAAGATCT CGCAGACCGA CGAGACCGCG TTCGAGATCG GCCGCAACGT CGCCAACAGC
GAAGGCGCGG TCGTTTTCGA GAACGACTAC TTCCAGCTCA TCCAGTACAA GCCGCTGACA
GCCAAGGTGC ATGCGCGCCC GCTGCTGCTG GTGCCGCCCT GCATCAACAA GTACTACATC
CTCGATCTAC AGCCGGCCAA TTCGCTCGTG CGCTATGCGG TGGAGCAGGG CAATACCGTG
TTCCTGGTGT CGTGGCGCAA TCCAGACGCG AGCATGGCGT CCCGCACGTG GGATGACTAC
ATCGAAGGCG GCGCCATCGA GGCCATTCGT GTCGCGCGCG AGATCTCAGC GCAGGACCAG
ATCAATGTGC TGGGCTTTTG CGTGGGCGGA ACGATCCTGT CGACTGCGCT GGCGGTGCTG
GCTGAACGCG GCGAGCATCC TGCGGCAAGC CTGACCCTCC TGACGACGCT GCTGGACTTT
ACTGACACCG GCATTCTCGA CGTGTTTGTC GACCAGGCCC AGGTGGAAAT GCGTGAAAAG
ACCATCGGCA GCAATGCGCC GACCGGCCCG GGCCTGCTGC GTGGCGTGGA ACTGGCAAAC
ACGTTCTCGT TCCTGCGCCC GAACGATCTC GTCTGGAACT ACGTTGTCGA GAACTATCTG
AAAGGCAAGA CCCCCGCGCC GTTCGACCTG CTGTACTGGA ATGGCGATTC GACCAATTTG
CCCGGTCCGT GGTACTGCTG GTACCTGCGC CATACGTATC TGCAGAATGA CCTCAAGACG
CCGGGCGAGC TGAAGGTGAA CGGCACGCCG GTGGATCTCG GCAAGATTGA TGCGCCGGTC
TACATCTACG GTTCACGTGA AGATCACATC GTCCCTTGGA AGTCGGCCTA TGGCTCGGTG
CCGCTGCTCA AGGGCAAGCG GCGTTTTGTG TTGGGCGCCT CCGGCCATAT CGCAGGCGTG
ATCAACCCGC CTGCGGCCAA CAAGCGTTCG CACTGGATCA ATGCCAAGCT GCCTGAGTCC
GCCGATGCGT GGTTCGAGGG CGCGAAGGAG CATCCGGGCA GCTGGTGGCC GGATTGGTCA
ACTTGGCTCG CCTCACATGC CGGTGCGCAG AAAGCTGCAC CCAAAGGTTA TGGCAATGCG
AACTACCCGG CCATCGAGCC GGCACCTGGC CGCTACGTCA AACAGAAAGC GTAA
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| Protein sequence | MASRQSTSSK ASSAHTQAPW PGLSDPTQWA EQFKQWQAFA GAFAQPGAAA PGLGQFNGAA
MGEGAAPFAL IPHERLAEIQ QKYLEEWLQI WRHMSTGESA EAVAPSDRRF SNDAWRKSPL
YGYAAAFYML NARTLMEMAD AVQADVKTRE RVRFAVSQWT AAMSPSNFLA TNPEAQKQLI
ESRGESLRTG ILNMLQDMER GKISQTDETA FEIGRNVANS EGAVVFENDY FQLIQYKPLT
AKVHARPLLL VPPCINKYYI LDLQPANSLV RYAVEQGNTV FLVSWRNPDA SMASRTWDDY
IEGGAIEAIR VAREISAQDQ INVLGFCVGG TILSTALAVL AERGEHPAAS LTLLTTLLDF
TDTGILDVFV DQAQVEMREK TIGSNAPTGP GLLRGVELAN TFSFLRPNDL VWNYVVENYL
KGKTPAPFDL LYWNGDSTNL PGPWYCWYLR HTYLQNDLKT PGELKVNGTP VDLGKIDAPV
YIYGSREDHI VPWKSAYGSV PLLKGKRRFV LGASGHIAGV INPPAANKRS HWINAKLPES
ADAWFEGAKE HPGSWWPDWS TWLASHAGAQ KAAPKGYGNA NYPAIEPAPG RYVKQKA
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