| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1571 |
|---|
| Symbol | |
|---|
| ID | 8019219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1667613 |
|---|
| End bp | 1668161 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644830349 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002981527 |
|---|
| Protein GI | 241663167 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0550639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0886158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCA TTGGTGACAA GCTCGAACCG TTCAAGGTCG TCGGCGTCAA GCCCGGGTTC
AACAATCACG AAGAGAACGG CGAGTCGGCG TTCGAAGACA TCACCGAGAC CTCGTTCCCG
GGCAAATGGA AAGTCATCTT CTTCTATCCG AAGGACTTCA CCTTTGTCTG CCCGACCGAA
ATCGTCGCCT TCGCCAAACT GAACGACGAC TTTGCCGACC GCGACACGAT CGTGCTGGGT
GGCTCGACCG ACAATGAATT CGTCAAGCTC GCATGGCGCC GCGAGCACAA AGACCTGAAC
AAGCTCAACC AGTGGTCGTT TGCAGACTCG ACGGGTGCGC TGGTCGACCA GCTTGGCGTA
CGCGAGCACG AGGCCGGTGT TGCGTTGCGC GCCACGTTCA TCGTCGATCC GGACAACGTG
ATCCAGCACG TGTCGGTCAA CAACCTGAAC GTGGGTCGCA ACCCGGACGA AGTGCTGCGC
ATTCTCGACG GCCTGCAGAC GGACGAGTTG TGCCCGTGTA ACCGCGCAGT CGGCGGTGCG
ACGCTGTAA
|
|---|
| Protein sequence | MKTIGDKLEP FKVVGVKPGF NNHEENGESA FEDITETSFP GKWKVIFFYP KDFTFVCPTE
IVAFAKLNDD FADRDTIVLG GSTDNEFVKL AWRREHKDLN KLNQWSFADS TGALVDQLGV
REHEAGVALR ATFIVDPDNV IQHVSVNNLN VGRNPDEVLR ILDGLQTDEL CPCNRAVGGA
TL
|
|---|
| |