| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1564 |
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| Symbol | |
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| ID | 8019212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1659430 |
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| End bp | 1660638 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830342 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002981520 |
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| Protein GI | 241663160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.18238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.253617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGT TGCGTTTGCC GTACCCGCAT TCCGACTTCA CCGGTTTCTC CGACACGCGG
TCTCGGCCGC GCTGGCGTTC ATTGGCGACA GCGGCATCGG CGGCTTTGCT GACCGGCGCG
GCGCTACTGG CCGGCTGCAG CAAGGAGGCA CCCAAGGCGC CCGAGGTGCG CCCGGTGCGG
ACCATGACAG TGACCAGCGA GCAGGGCGCC GGCACAGCGG AATTCTCCGG CGACGTACGC
CCGCGCATCG AATCGCGCCT GGGCTTCCGC GTACCGGGCA AGATCGTCGC CCGGCTCGTG
GACGTTGGCG CCACCGTCAA GAAAGGCCAG GTGCTTGCGC GGCTGGACCC GACCGATCTG
GCTCTTGCCC AGCAATCGGC CCAGGCGCAG TTGTCGGCGG CCAAGACCGA TCGCGATCTG
GCCGCGGCTG ATCTCAAGCG CTACTCCGAA CTGTTCGCCA AGGGCTTTAT CAGCGCGGCG
GAGCAGCAAC GCCATCAAGC CAACTATGAC GCCGCGCAAG CCCGCTACGA GCAGGCCGGG
GCCGGCTATC GCAACCAGGT GAATCAAGCC GGTTATGCCA CGCTTGAAGC CGACGCCGAT
GGCGTAGTGA CCGGGGTCGA CGCCGAAGTC GGACAGGTGG TGTCCGCAGG CCAACCGGTG
GTGCGCGTGG CGCAAACGGC AGAGAAGGAA GTCGTGGTCG GCATTCCCGA GGATCAGGTG
GATACGCTGC GCAAATCGCC TGAGGTGAGC GTGAAGCTGT GGGCCGATCA GTCGCGCAGC
ATTCCTGCCA AGGTGCGCGA GATTGCGCCG GCAGCCGACC CGGTCACACG CACGTACACC
GTCAAGATTT CGGTACCGAA TCCACCGCCG GAACTCAAAC TTGGCATGAC CGCAGCGGCC
ACCTTTGTGC GGCCCGGCGG CGGTGGCGAT AGCGGCGGCA TGGGCGTGCG GGTGCCGATG
AGCGCGCTGC TCCAGGATCA AGGCAAAAAT GTGGTCTGGC TGTACGACGC CGCATCGCAA
ACGGTGAAGC CCGTGCCGGT GACGGTGGGC GCGCCACGCG ACAACGTGCT GCTGGTGACG
AGCGGGCTGC AACCCGGCCA GACCATCGTG ACCGCCGGCG TGCACCTGCT CAAGGCCGGC
CAGAAGGTGA TGCCGATGGC GCCGGCCGAT CAGCCGTCGG CGCAGTCCGC CATCACGCCG
CGCCGGTAA
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| Protein sequence | MPALRLPYPH SDFTGFSDTR SRPRWRSLAT AASAALLTGA ALLAGCSKEA PKAPEVRPVR
TMTVTSEQGA GTAEFSGDVR PRIESRLGFR VPGKIVARLV DVGATVKKGQ VLARLDPTDL
ALAQQSAQAQ LSAAKTDRDL AAADLKRYSE LFAKGFISAA EQQRHQANYD AAQARYEQAG
AGYRNQVNQA GYATLEADAD GVVTGVDAEV GQVVSAGQPV VRVAQTAEKE VVVGIPEDQV
DTLRKSPEVS VKLWADQSRS IPAKVREIAP AADPVTRTYT VKISVPNPPP ELKLGMTAAA
TFVRPGGGGD SGGMGVRVPM SALLQDQGKN VVWLYDAASQ TVKPVPVTVG APRDNVLLVT
SGLQPGQTIV TAGVHLLKAG QKVMPMAPAD QPSAQSAITP RR
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