| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1563 |
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| Symbol | |
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| ID | 8019211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1656268 |
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| End bp | 1659387 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830341 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002981519 |
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| Protein GI | 241663159 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.324661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.366734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT CCCGTTTCAA CCTGTCACGC TGGGCGCTTG AACATCAACC GCTCACGCGC
TTCTTGCTGG TGGCGCTGTT GCTCGGCGGC ATCTTTGCGT ATTCCAAGCT GGGGCAGGAC
GAAGATCCGC CCTTCACCTT CCGCGCGATG GTCGTGCAGG CCTTCTGGCC CGGCGCCACG
GCCGAGCAGA TGTCGCGCCA GGTGACCGAC AAGATCGAGA AGGCGCTGCA GGAGGTGCCA
TACGCTTGGA AGATCCGCAG CTACTCCAAG CCCGGCGAAA CGCTCGTCAC CTTCCAACTG
GCCGACACGT CGCCCGCCAA GGAAACGCAG CAGCTTTGGT ACACCGTGCG CAAGAAAGTG
GGCGATATCG CGCCTACGTT GCCGCAAGGC GTGCGCGGGC CGTACTTCAA TGATGATTTC
GGCGACGTGT ATGGCTCGAT CTATGCGCTA TCCGCCGATG GCTTCACCTA TCGCCAGCTC
AACGACTACG CCGATGCGAT CCGCCAGCAG CTGCTGCGCG TGCCCAACGT TGCCAAGGTC
GAACTGCTGG GCGACCAGGA CGAAAAGATC TACATCGAGT TCCAGCAGGC CAAGCTGTCG
CAGATGGGGC TGGACATCAA CAGCATCGCC ACGCAGATCA GCCAGCAGAA CAACATCGGC
CCCAGCGGTG TGCTGGTCAC GCCGACCGAC AACGTGCAGA TTCGCCTGTC GGGCCAGTTT
TCGGACATCC GCGATCTGGA GAACCTGACG CTGCGCGGCC CCGGCGGCAC GACCAATATC
CGCCTCGGCG ACATCGCCAC GGTCAAGCAC GGCTACGTGG ACCCGCCGCA CGCCAAGATG
CGCTTCAACG GCAAGGAGGT GATCGGCCTG GGTATCTCCA TGACCAAGGG CGGTGACATC
ATCCAGCTCG GCAAGGACTT GCGCGCCACG GTCGACAAGA TCCGCGCAAA GCTGCCGATG
GGCATCGAGA TGCAGCAGGT GCAGAACCAG CCGAAATCGG TGCAGAGTTC GGTGGGCGAG
TTCGTGCACG TGCTGATCGA GGCGGTGGTG ATCGTGCTTG GCGTGAGTTT CCTCTCGCTC
GGGTTGCATA CCAAGCCGAA GCTGCGCATT GACGTGTGGC CGGGCCTGGT GGTGGGCCTG
ACGATCCCGC TGGTGCTGGC GGTGACGTTC CTGTTCATGA ACATCTTCGA CATCGGGCTG
CACAAGATTT CGCTTGGTGC GCTGATCATC GCACTGGGCC TGCTGGTGGA CGACGCGATC
ATCGCGGTCG AAATGATGGT GCGCAAGCTG GAAGAGGGCT TCTCCAAGAT GGAGGCCGCC
ACTTTCGCGT ACACGTCGAC CGCCATGCCG ATGCTGACCG GCACGCTCAT CACCGCCACG
GGCTTTCTGC CGGTGGGGCT GGCGCGTTCG ACGGTGGGTG AATACACCTT CGGCATTTTT
GCGGTGACGG CGCTGGCGCT GGTGCTGTCG TGGTTTGCGG CGGTGGTGTT TGTGCCGTAT
CTCGGTTTCC TGCTGCTACG GACGAAATCG CATGTGGAGG GCGGCGGGCA CCACGAGTTG
TTCGACACCC CGTTCTACAA CCGCTTCCGC GGCTGGGTGA ACTGGTGCGT GGAATACCGC
AAGACGGTGA TCGTCATCAC GCTGGTGGCC TTTGGGCTGG GCGTGTTCGG TTTCAAGTAT
GTCGAGAAGC AGTTCTTCCC CGACTCCAGC CGCCCGGAAC TGATGGTCGA GCTGTGGCTG
CCGGAAGGCT CCAGCTTCAA CCAGACCGAA GCTGAAGCCA AACGCTTCGA GGCGCTGATG
CGCAAGGAGC AGAACGTCGA CAGCGTGACG CTGTTCATCG GCTCGGGTGC GCCGCGCTTC
TACCTGCCGC TGGACCAGAT TCTTCCGCAG ACAAACGTGG CGCAGGCCAT CGTGATGCCC
ACTTCGCTGG AGGCGCGCGA GGGTGTGCGG CAACACGTCA TCGGGCTGCT GAAGTCGCAA
TTCCCGCATC TGCGCGGCCG CGTGAAACTG CTGCCGAACG GACCGCCGGT GCCGTATCCG
GTGCAGTTCC GCGTGATGGG CCCGGACATT GGCGGGGTGC GCAAGATTGC CGATCAGGTC
AAGGCCATCA TGAGCGCCAA TCCGAACACC GTCGGCGTGA ACGACAACTG GAACGAGAAC
GTCAAGGTGC TGCGCCTGGA CATCGACCAG GACAAGGCGC GCGCGCTGGG TGTGTCGACC
GGTTCCATCT CGCAGGTCAC GCAGACGGTG ATGTCCGGCG CGCCCATCGC CCAATACCGC
GACGGCGACA AGCTGCTCGA CATCGTGATG CGTCCGCAGG AGGACGAGCG CAACACGCTC
GACGCACTGC AGCGCGTGCA AGTCCCGACC AGCAGTGGCC GCACGGTGCC GCTGACGCAG
GTGGCGCGAG TTGGTTTTGC GTGGGAACCC GGCGTGATCT GGCGTGAGAA CCGCGACTAC
GGCATCACCG TGCAATCCGA CGTGGTGGAC GGCGTGCAGG GCCCGACCGT GACCGCGCAG
ATCAACCCGC TGCTCGACAA GATTCGCGCG GACTTGCCGC CGGACTATCA GATCAAGATT
GCCGGCGCAG AAGAGGAAAG TGCCAACGCG GGTGCGTCCA TCGCTGCACA GATGCCGCTG
TGCATTTTCA TCATTTTCAC GCTGCTGATG CTCCAGCTGC ACAGCTTCTC GCGCTCGGTG
ATGGTGTTCC TGACCGGGCC GCTGGGGCTG ATTGGCGCGG CAGCCACGTT GCTGCTGCTG
CGCGCGCCGA TGGGCTTTGT TGCGCAACTC GGTATTACGG CGCTGATCGG GATGATCATC
CGCAACTCGG TGATTCTGGT GGACCAGATC GAGCAGGATG TGGCGGCCGG CGTGCCGACG
TGGAATGCCA TCGTCGAAGC GGCCGTGCGT CGGTTCCGGC CGATCATCCT GACTGCGGCG
GCGGCGGTGC TGGCAATGAT TCCGCTGTCG CGCAGCGTGT TCTGGGGCCC GATGGCCGCC
GCCATCATGG GTGGCCTGAT CATCGCCACG GTCTTGACGC TGCTGTTCCT GCCGGCGCTG
TATGCGGCGT GGTTCCGCGT CAAGCGGCCC GATGCGCAAG CGGCCGCCCC GGCGGTCTGA
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| Protein sequence | MEHSRFNLSR WALEHQPLTR FLLVALLLGG IFAYSKLGQD EDPPFTFRAM VVQAFWPGAT
AEQMSRQVTD KIEKALQEVP YAWKIRSYSK PGETLVTFQL ADTSPAKETQ QLWYTVRKKV
GDIAPTLPQG VRGPYFNDDF GDVYGSIYAL SADGFTYRQL NDYADAIRQQ LLRVPNVAKV
ELLGDQDEKI YIEFQQAKLS QMGLDINSIA TQISQQNNIG PSGVLVTPTD NVQIRLSGQF
SDIRDLENLT LRGPGGTTNI RLGDIATVKH GYVDPPHAKM RFNGKEVIGL GISMTKGGDI
IQLGKDLRAT VDKIRAKLPM GIEMQQVQNQ PKSVQSSVGE FVHVLIEAVV IVLGVSFLSL
GLHTKPKLRI DVWPGLVVGL TIPLVLAVTF LFMNIFDIGL HKISLGALII ALGLLVDDAI
IAVEMMVRKL EEGFSKMEAA TFAYTSTAMP MLTGTLITAT GFLPVGLARS TVGEYTFGIF
AVTALALVLS WFAAVVFVPY LGFLLLRTKS HVEGGGHHEL FDTPFYNRFR GWVNWCVEYR
KTVIVITLVA FGLGVFGFKY VEKQFFPDSS RPELMVELWL PEGSSFNQTE AEAKRFEALM
RKEQNVDSVT LFIGSGAPRF YLPLDQILPQ TNVAQAIVMP TSLEAREGVR QHVIGLLKSQ
FPHLRGRVKL LPNGPPVPYP VQFRVMGPDI GGVRKIADQV KAIMSANPNT VGVNDNWNEN
VKVLRLDIDQ DKARALGVST GSISQVTQTV MSGAPIAQYR DGDKLLDIVM RPQEDERNTL
DALQRVQVPT SSGRTVPLTQ VARVGFAWEP GVIWRENRDY GITVQSDVVD GVQGPTVTAQ
INPLLDKIRA DLPPDYQIKI AGAEEESANA GASIAAQMPL CIFIIFTLLM LQLHSFSRSV
MVFLTGPLGL IGAAATLLLL RAPMGFVAQL GITALIGMII RNSVILVDQI EQDVAAGVPT
WNAIVEAAVR RFRPIILTAA AAVLAMIPLS RSVFWGPMAA AIMGGLIIAT VLTLLFLPAL
YAAWFRVKRP DAQAAAPAV
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