| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1489 |
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| Symbol | |
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| ID | 8019134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1571291 |
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| End bp | 1572826 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830267 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002981448 |
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| Protein GI | 241663088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00379868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.284901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC ACGCTACCCC GTCCTCAGAG ACGCCGGGCT TGCGCCGCAC CTTGCGCGCG
CGCCATCTCA CCATGATCGC CATCGGCGGG TCGATCGGCA CCGGGCTCTT CGTGGCCTCC
GGCGCTTCGG TCTCCCAAGC CGGCCCCGGA GGCGCCCTCG CCGCCTACAT TCTGATCGGG
GCGATGGTCT ACTTTCTGAT GACCAGCCTA GGCGAACTTG CCGCCTACAT GCCGGTTTCC
GGGTCGTTTG CCACCTACGG CGCGCTGTAC GTGGACGAAG GCTTTGGCTT CGCGCTCGGC
TGGAATTATT GGTACAACTG GGCCGTGACG ATTGCCGTTG AACTGGCGGC CGCGCAGCTC
GTCATGCATT ACTGGTTTCC GGATGTGCCG GGCGTGCTGT GGAGCGCCGT GTTCCTCGCC
ATCATGTTCC TGCTCAACGC CATCTCGGTG CGCGGCTTTG GCGAGGCGGA ATACTGGTTC
GCGCTCGTCA AGGTGGTCAC GGTCATCTTC TTTATCGGCA TTGGCCTGGC GATGATCTTC
GGGATCATGA AGGGCGGTCC GCAATCGGGC CTGCCGAACC TGACGATCGG CGATGCGCCG
TTCGTGGGCG GGTTGCCGGC GATGATCGGC GTGGCGATGA TCGCGGGGTT CTCGTTCCAG
GGGACGGAGC TGATTGGCGT GGCGGCCGGC GAATCGGCCG ACCCGGCGCG CACCATTCCG
CGTGCGGTCA AACAGGTGTT CTGGCGCATC CTGCTGTTCT ATGTGCTGGC CATCTTCATC
ATCGGCGTGC TGGTGCCATA CACCGATCCG AATCTGCTCT CGACGGAAGT CACCAACATT
GGCGTGAGCC CGTTCACGCT GGTGTTCAAG CATGCCGGCC TGGCGTTTGC GGCGGGGTTG
ATGAATGCGG TGATCCTGAC GGCCGTGCTG TCGGCGGGCA ACTCGGGCAT GTATGCATCC
ACGCGCATGC TCTACAACCT CGCCACCGAG GGCCGCGCAC CGCGCGTCTT TGCGCAACTG
ACCCGGAACG GTGTGCCGCG CAATGCGCTG CTGGCCACGA CTGCCGTCGG CGCGCTGTGT
TTCCTGAGTT CGCTGTATGG CGACAAAACG GTCTACCTGT GGCTGCTCAA TACGTCCGGC
ATGACTGGCT TCGTCGCATG GCTTGGCATT GCCATCAGTC ACTATCGCTT CCGCAAGGGG
CTCGTGGCGC AGGGGCACGA TCCGGCGCAG TTGCCATACC GCTCCAAGTT TTTCCCATAT
GGCCCGTTGT TCGCGTTCGG GCTGTGCCTG GTCATCACGC TCGGCCAGAA CTACCAGGCC
TTTACCAGCG GCACCGTCGA TTGGCCGGCG GTGATCGCCA CGTACATCGG CATCCCCGTC
TTCTTTCTGA TCTGGATCGG TTACCGGCTG GTGCGTGGCG GCGGCATTGT CCGTTACCAG
GACATGCACT TCCCGCGCCC GCCAGTGCTG CGCGATTCGC TGGCCGGCCA AGACCCCGGC
CCCGAATTGC CGACCGTGGC AAACAGTACC CAGTAA
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| Protein sequence | MSEHATPSSE TPGLRRTLRA RHLTMIAIGG SIGTGLFVAS GASVSQAGPG GALAAYILIG
AMVYFLMTSL GELAAYMPVS GSFATYGALY VDEGFGFALG WNYWYNWAVT IAVELAAAQL
VMHYWFPDVP GVLWSAVFLA IMFLLNAISV RGFGEAEYWF ALVKVVTVIF FIGIGLAMIF
GIMKGGPQSG LPNLTIGDAP FVGGLPAMIG VAMIAGFSFQ GTELIGVAAG ESADPARTIP
RAVKQVFWRI LLFYVLAIFI IGVLVPYTDP NLLSTEVTNI GVSPFTLVFK HAGLAFAAGL
MNAVILTAVL SAGNSGMYAS TRMLYNLATE GRAPRVFAQL TRNGVPRNAL LATTAVGALC
FLSSLYGDKT VYLWLLNTSG MTGFVAWLGI AISHYRFRKG LVAQGHDPAQ LPYRSKFFPY
GPLFAFGLCL VITLGQNYQA FTSGTVDWPA VIATYIGIPV FFLIWIGYRL VRGGGIVRYQ
DMHFPRPPVL RDSLAGQDPG PELPTVANST Q
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