Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1454 |
Symbol | |
ID | 8019099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1536453 |
End bp | 1537256 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830232 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981413 |
Protein GI | 241663053 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.614106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.119882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCCG GGGCCGTAAC CGAAATCGCC GCGTGCGCTG AGGATGACGA GGCGCTTGTT CATGCCGGCG AGCAGCTGTA TCCGGTGCTC AACACCGGCT TTGATGCGTT TGCGCAGGCC ATCGATGCCA TTCGCGGCAC GCAGGCACAA CCGGGGCGTC AGCGCGTGAC GCTCACGGCA CCGATGGGGC TTGCTGCGCG CTGGCTGGTG CCGCGGCTGG GTGAATTTGC GACGCAGCAT CCGGAGGTGG ATCTGCGCAT TCATGCGTCC GACACCGTGG TCGACCTCCA TGGCGGCAGC GCAGACCTTG CCGTGCGCTA TGGCGATACG CCCGTCACGG GGGGCGGCCT CATCACCGAA CATCTCTTTG GCGACGCCTA TGCGCCGGTC TGCCATCCGG GCCTGAACGT GCGGTCGCAC GACGATCTGA CGCGCGTGCC GCTCATCCAC TCCGAATGGC AACGCACGCT GCCGCAGGCG ATCGGCTGGC CGATGTGGGC ACGCGCGGCG GGTATCGAGC ACACGCTGAA GACGGACACG GGCATCGTGC TGTCCGACGA CGGGCATGCC ATGTCGGCGG CAATGGCGGG GCAAGGCGTG ATCCTGGCGA ACCTGCCGCT GGTGCGCGAT GCGCTGGAGG CGGGCACGCT CGTCCAGCCT TTCGCAGCGC CGGTCATTCA GCGCTACGCC TTCTGGGCCG TGGCGCCATC TGCGCGGCTT GAAGACGCTG CCGTGCGCGC GGTGTGGGAT TGGCTATGCG CGTGCCGGGA AAACACGGCA CGTGTGCATC GCTCAGCCCA ATAG
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Protein sequence | MLAGAVTEIA ACAEDDEALV HAGEQLYPVL NTGFDAFAQA IDAIRGTQAQ PGRQRVTLTA PMGLAARWLV PRLGEFATQH PEVDLRIHAS DTVVDLHGGS ADLAVRYGDT PVTGGGLITE HLFGDAYAPV CHPGLNVRSH DDLTRVPLIH SEWQRTLPQA IGWPMWARAA GIEHTLKTDT GIVLSDDGHA MSAAMAGQGV ILANLPLVRD ALEAGTLVQP FAAPVIQRYA FWAVAPSARL EDAAVRAVWD WLCACRENTA RVHRSAQ
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