Gene Rpic12D_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1454 
Symbol 
ID8019099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1536453 
End bp1537256 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID644830232 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002981413 
Protein GI241663053 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.614106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.119882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCCG GGGCCGTAAC CGAAATCGCC GCGTGCGCTG AGGATGACGA GGCGCTTGTT 
CATGCCGGCG AGCAGCTGTA TCCGGTGCTC AACACCGGCT TTGATGCGTT TGCGCAGGCC
ATCGATGCCA TTCGCGGCAC GCAGGCACAA CCGGGGCGTC AGCGCGTGAC GCTCACGGCA
CCGATGGGGC TTGCTGCGCG CTGGCTGGTG CCGCGGCTGG GTGAATTTGC GACGCAGCAT
CCGGAGGTGG ATCTGCGCAT TCATGCGTCC GACACCGTGG TCGACCTCCA TGGCGGCAGC
GCAGACCTTG CCGTGCGCTA TGGCGATACG CCCGTCACGG GGGGCGGCCT CATCACCGAA
CATCTCTTTG GCGACGCCTA TGCGCCGGTC TGCCATCCGG GCCTGAACGT GCGGTCGCAC
GACGATCTGA CGCGCGTGCC GCTCATCCAC TCCGAATGGC AACGCACGCT GCCGCAGGCG
ATCGGCTGGC CGATGTGGGC ACGCGCGGCG GGTATCGAGC ACACGCTGAA GACGGACACG
GGCATCGTGC TGTCCGACGA CGGGCATGCC ATGTCGGCGG CAATGGCGGG GCAAGGCGTG
ATCCTGGCGA ACCTGCCGCT GGTGCGCGAT GCGCTGGAGG CGGGCACGCT CGTCCAGCCT
TTCGCAGCGC CGGTCATTCA GCGCTACGCC TTCTGGGCCG TGGCGCCATC TGCGCGGCTT
GAAGACGCTG CCGTGCGCGC GGTGTGGGAT TGGCTATGCG CGTGCCGGGA AAACACGGCA
CGTGTGCATC GCTCAGCCCA ATAG
 
Protein sequence
MLAGAVTEIA ACAEDDEALV HAGEQLYPVL NTGFDAFAQA IDAIRGTQAQ PGRQRVTLTA 
PMGLAARWLV PRLGEFATQH PEVDLRIHAS DTVVDLHGGS ADLAVRYGDT PVTGGGLITE
HLFGDAYAPV CHPGLNVRSH DDLTRVPLIH SEWQRTLPQA IGWPMWARAA GIEHTLKTDT
GIVLSDDGHA MSAAMAGQGV ILANLPLVRD ALEAGTLVQP FAAPVIQRYA FWAVAPSARL
EDAAVRAVWD WLCACRENTA RVHRSAQ