Gene Rpic12D_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1438 
Symbol 
ID8019083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1519612 
End bp1520130 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID644830216 
Productlipoprotein transmembrane 
Protein accessionYP_002981397 
Protein GI241663037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.565531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGA TGCGTTGGCT GGCGATAGCG ATTGTGGTGG CAGCGATGGC GGGATGTGCT 
GCCTTGGAGT CCCCCGTCAC CAAGGGACAG CGACTGGTCG GCGCGGACGG GCCCGCTGTG
CAGGCGCAGT TCGGCCCGCC GCGCGAAACC TATCCGCTCG ATGGTGGCAC CCGCTGGCTC
TATCCGACCA AACCGTACGG CCAGTTCACC TACGCGGCCG ACTTTGATGC CGGCGGCAAG
CTCGTCGCCT TCAAGCAAGT CCTGAGCAGT CTCGAATTTG CCCAGGCCAA GATCGGCGTC
TGGACCCGCG ACGACGTGCT CCGGCACTTC GGTCAGCCGG TGGAGACCGC GTATTTCCCA
CGCATGGAAC GGCTGGTCTG GTCGTACCGC TTCAAGGCGG ACGACGTCTG GCCGTCGCTG
ATGCATTTCT ACTTCGACCC GGCCGGCGTT CTGCAACTGA CGCAGATCAC GCCGGACCCG
CTTTACGATC CGGACCGCCC TCGGCTGTTC CGCCGCTAA
 
Protein sequence
MRAMRWLAIA IVVAAMAGCA ALESPVTKGQ RLVGADGPAV QAQFGPPRET YPLDGGTRWL 
YPTKPYGQFT YAADFDAGGK LVAFKQVLSS LEFAQAKIGV WTRDDVLRHF GQPVETAYFP
RMERLVWSYR FKADDVWPSL MHFYFDPAGV LQLTQITPDP LYDPDRPRLF RR