Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1438 |
Symbol | |
ID | 8019083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1519612 |
End bp | 1520130 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830216 |
Product | lipoprotein transmembrane |
Protein accession | YP_002981397 |
Protein GI | 241663037 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.44922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.565531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGCGA TGCGTTGGCT GGCGATAGCG ATTGTGGTGG CAGCGATGGC GGGATGTGCT GCCTTGGAGT CCCCCGTCAC CAAGGGACAG CGACTGGTCG GCGCGGACGG GCCCGCTGTG CAGGCGCAGT TCGGCCCGCC GCGCGAAACC TATCCGCTCG ATGGTGGCAC CCGCTGGCTC TATCCGACCA AACCGTACGG CCAGTTCACC TACGCGGCCG ACTTTGATGC CGGCGGCAAG CTCGTCGCCT TCAAGCAAGT CCTGAGCAGT CTCGAATTTG CCCAGGCCAA GATCGGCGTC TGGACCCGCG ACGACGTGCT CCGGCACTTC GGTCAGCCGG TGGAGACCGC GTATTTCCCA CGCATGGAAC GGCTGGTCTG GTCGTACCGC TTCAAGGCGG ACGACGTCTG GCCGTCGCTG ATGCATTTCT ACTTCGACCC GGCCGGCGTT CTGCAACTGA CGCAGATCAC GCCGGACCCG CTTTACGATC CGGACCGCCC TCGGCTGTTC CGCCGCTAA
|
Protein sequence | MRAMRWLAIA IVVAAMAGCA ALESPVTKGQ RLVGADGPAV QAQFGPPRET YPLDGGTRWL YPTKPYGQFT YAADFDAGGK LVAFKQVLSS LEFAQAKIGV WTRDDVLRHF GQPVETAYFP RMERLVWSYR FKADDVWPSL MHFYFDPAGV LQLTQITPDP LYDPDRPRLF RR
|
| |