Gene Rpic12D_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1338 
Symbol 
ID8018983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1416187 
End bp1417308 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content65% 
IMG OID644830118 
Productputative transmembrane protein 
Protein accessionYP_002981299 
Protein GI241662939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG ATGGTTTGAG GGGCTGGCGC CGGATGGCGC TCGGGGTCGC CATGACAGCG 
ATGCTGGGGC TGGCCGCATG CGCAGGCCCG CAGACGCCGG AAACAACCGG AGCCGCACCG
GTTGCCCAAA AGCCCCAAGG GCCGGTGTGG CAACGCGTGC ATCTTGGTAC CGATGCAGCG
GGCTACGATT TCCCCGTCTA CGCCAACCAT CCGCTTGATG GCAACCTCGG CAGCATCCGC
GAAGTCGTGT TCGTGCAGCA CGGCCTGCAG CGCAACGGAA ACGATTACTA CACCGCTGGC
GCCGAGCTGC TCCAGGCCAG CGGCCGTAAT CCCGACGAGG TCCTGCTGAT TGCCCCGAAC
TTTCCCGGTA CGCCTGACGA AGGCAAAGGC TTCGACGGCA TGCCGGTGTG GTCGGTGGAC
GGCTGGATTG GCGGCTTCAA CGCCACCAAC GCACCGTATA CGGACCTGAG TTCGCTCAAG
GTGCTCGATG ACCTGATCGG CTACGTGACC GACCCGGCAC GCGCGCCCAA CGTCAAGCGC
GTAACGGTGG CAGGCCATTC GGGCGGCGGC CAGATCGTGC AACGCTACGC TGTGCTCAAC
AACGTCGACG AGGCGATCCG CAAGCGCGGC ATCGACCTGC GCTACGTGAT CGCCAACCCC
TCCTCATATC TGTATTTCAC GCCGGAGCGT CCGCGCGGCA AGGGGTTTGC GCGCTACAGC
ACCAGCGTCT GCCCGGACTA CGACCACTAC AAGTACGGCA TGGTCGACAT GGTTCCGTAT
GCCGCCGGCA AGACCGGTCG CCAATTGTTC AACCGATACG CGCAGCGCCA CGTGACTTAC
CTGGTCGGCA CGCACGACAA CGACCCGAAT CACCGCGTAC TCGACAAGTT GTGCGGTGCC
GAGGCTGAAG GCCCGACGCG CCTGGATCGC GCACGTAACT ACTGGCGCTA CGAGCGCTAT
CTGGCGGGGC GCAAGCGCGT CAACCATCAG GCGCACGAAG TGGTCGGCGT AGGCCACGAG
CAGGCGAAGA TGTTCGGTTC GCGTTGTGGC GCACAGGCCG TGTTCGGCAT GCCTGCGTCG
GCCAACACCT CGGGGGCAGC CTGCCAGGCT CCGCATCTGT AA
 
Protein sequence
MKRDGLRGWR RMALGVAMTA MLGLAACAGP QTPETTGAAP VAQKPQGPVW QRVHLGTDAA 
GYDFPVYANH PLDGNLGSIR EVVFVQHGLQ RNGNDYYTAG AELLQASGRN PDEVLLIAPN
FPGTPDEGKG FDGMPVWSVD GWIGGFNATN APYTDLSSLK VLDDLIGYVT DPARAPNVKR
VTVAGHSGGG QIVQRYAVLN NVDEAIRKRG IDLRYVIANP SSYLYFTPER PRGKGFARYS
TSVCPDYDHY KYGMVDMVPY AAGKTGRQLF NRYAQRHVTY LVGTHDNDPN HRVLDKLCGA
EAEGPTRLDR ARNYWRYERY LAGRKRVNHQ AHEVVGVGHE QAKMFGSRCG AQAVFGMPAS
ANTSGAACQA PHL