Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1322 |
Symbol | |
ID | 8018967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1397626 |
End bp | 1398651 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644830102 |
Product | peptidase S58 DmpA |
Protein accession | YP_002981283 |
Protein GI | 241662923 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3191] L-aminopeptidase/D-esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0281785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTGA GCCTTCCGCA CATCGGCGCA CTGCCGGCCG GCGCACGCGA CAGCATCTCC GACGTGGCAG GCGTGACCGT CGGCCACGCC ACGATTGCCG GCGGCGACAT CCAGACCGGC GTGACCGTGG TACGCCCGCA TGCCGGCGAC CCGTTCCTCG ACAAGGTGCC CGCCGCCAGC GTGGTGCTCA ACGGTTTCGG CAAGAGCATC GGCCTGGTGC AGGTGGACGA ACTCGGCGTG CTGGAAACGC CGATTGCGCT GACCAACACG TTTGCCGTGG GCGCCGTGGC GCAAGCGCAG ATCCGCCAGG CGGTTGCCGC CAACCCGCAG ATCGGCCGCG CGTGGTCGAC CGTCAATCCG CTCGTCTTCG AATGCAATGA CGGCTACCTG AACGACCTGC AGGCGTTTGC CGTGCAGGAC GTGCACTACG ACGCGGCCTA CGCTGCGGCA GCCCAAGCGT TCGAGCAAGG CGCGGTGGGG GCAGGGCGCG GGATGTCGTC GTTCGGCGTG AAGGGCGGCA TCGGTTCTGC ATCGCGCGTG GTGACACTCG CCGACGGCGC ACAACGTACG GTCGGCGCGC TCGTGCTGTC CAACTTTGGC GTGACCAAAA ACCTGACACT TGGCGGGCGC AACGTCGGTG CGGAATTGGC GAGCGCGCTC GCCGCGGTCA CACCGGAGCC GGAGAAGGGT TCAATCATCA TGCTGCTCGC CACCGACGCG CCGCTGGACG CACGCCAGTT GCGCCGCCTC GCCTTGCGCG CAGGCGCAGG CCTGGCGCGC ACCGGCTCCG TCTTCGGTCA TGGCAGCGGA GACATCGCGT TGGCGTTCTC CACTGCCTAC ACCGTGCCGC ACGAAGGGGC ACGTGCCATG CCGGCCGTCG CCATGACGCA CGAGTCGCAT CTCGACCCGC TGTTCCAGGC CGCGGCCGAC AGCGTCGAAC AAGCCATCGT GCACGCGCTG TTTCGCGCAA CAGCCGTCAC CGGCCGCGAC GGCCACACGC GCCGCGCACT GACCGAACTG ATCTGA
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Protein sequence | MPLSLPHIGA LPAGARDSIS DVAGVTVGHA TIAGGDIQTG VTVVRPHAGD PFLDKVPAAS VVLNGFGKSI GLVQVDELGV LETPIALTNT FAVGAVAQAQ IRQAVAANPQ IGRAWSTVNP LVFECNDGYL NDLQAFAVQD VHYDAAYAAA AQAFEQGAVG AGRGMSSFGV KGGIGSASRV VTLADGAQRT VGALVLSNFG VTKNLTLGGR NVGAELASAL AAVTPEPEKG SIIMLLATDA PLDARQLRRL ALRAGAGLAR TGSVFGHGSG DIALAFSTAY TVPHEGARAM PAVAMTHESH LDPLFQAAAD SVEQAIVHAL FRATAVTGRD GHTRRALTEL I
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