Gene Rpic12D_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1317 
Symbol 
ID8018962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1391212 
End bp1392174 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID644830097 
Productpeptidase T2 asparaginase 2 
Protein accessionYP_002981278 
Protein GI241662918 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0193765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGC CCATCCTCGC CATCCACGGT GGCGCCGGCA CCATCACCCG CACGGCCATG 
AGTGCCGACA AGGAAGCCGC TTACCAGCAG GCGCTGCATG ACATCCTGGC CGCTGGACAA
CGCATCCTCG TGGACGGCGG CAGCGCTGTA GATGCTGTGA CCGAAGCCGT GCGCCTGCTC
GAAGAGTGCC CGCTGTTCAA CGCCGGCAAG GGCGCGGTGC TCACCAGCGC CGGCACGTAT
GAACTCGATG CGTCGATCAT GGACGGCGCC ACGCTGGCGG CCGGCGCAGT CACCTGCGTC
AAGCGCCTGC GCAATCCCAT CCTGGCTGCC CGCGCAGTGA TGGAGCGCAG CGAACACGTG
CTGTTCACCT CCGAAGGCGC CGAGGCTTTC GCGCAAGCGC AGGGCCTGGA GTTTGTCGAG
CCGGACTACT ACTACACCGA AGCGCGCTAC GCCCAATGGC AGCGCGCTCG CCAGCAAGAC
GGCATGGCGC TGCTCGATCA CGATGCCGCG TCGCTCATGG CAAAGGAAGC TGCACCCATC
GACCCGGACA ACAAGTTCGG CACCGTGGGC GCCGTGGCAT TCGACGCGCA AGGGCGCCTC
GCGGCGGCCA CCTCCACGGG CGGCGTCACC AACAAGAAGG TCGGCCGCGT GGGCGACACG
CCCATCGTCG GCGCGGGCTG CTTTGCGAAC AACGTTGCGG CCGTGTCGTG CACGGGCACG
GGCGAAATGT TTATCCGCGC CGTGGCTGCC TACGACATTG CCGCGCAGAT GGAGTACGCC
GGCAAGTCGC TGGCCGATGC GAGCAACGAC GTAGTCATGC GCAAGCTGAT GGCCATCAGC
GGCCGCGGCG GGCTGATCGC CGTGGACGCG CAAGGCAACG TCGCGTTGCC GTTCAACACA
GAAGGGATGT ACCGCGGGTT CGCACGCGGC GCGCAAGCGC CCGTGGTGTC GATCTATCGG
TAA
 
Protein sequence
MTTPILAIHG GAGTITRTAM SADKEAAYQQ ALHDILAAGQ RILVDGGSAV DAVTEAVRLL 
EECPLFNAGK GAVLTSAGTY ELDASIMDGA TLAAGAVTCV KRLRNPILAA RAVMERSEHV
LFTSEGAEAF AQAQGLEFVE PDYYYTEARY AQWQRARQQD GMALLDHDAA SLMAKEAAPI
DPDNKFGTVG AVAFDAQGRL AAATSTGGVT NKKVGRVGDT PIVGAGCFAN NVAAVSCTGT
GEMFIRAVAA YDIAAQMEYA GKSLADASND VVMRKLMAIS GRGGLIAVDA QGNVALPFNT
EGMYRGFARG AQAPVVSIYR