| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1302 |
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| Symbol | |
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| ID | 8018947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1374835 |
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| End bp | 1376415 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830082 |
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| Product | malate synthase |
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| Protein accession | YP_002981263 |
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| Protein GI | 241662903 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.561375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0349063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCA CGCTGCCCCA AGGCATGGAG ATCAAGGCTG AGATTCTGCC GGCCTACGAA
GACATTCTGA CCCCCGAAGC ACTGGCGCTG GTCGCCAAGC TGCACCGTGC CTTCCAGCCG
CGTCGTAAAG AGCTGCTGGC TGCCCGTGTC GAGCGCGCCA AGCGCCTGGA CGCCGGCGAG
CGCCCGGATT TCCTGCCGGA AACGAAGGCC GTGCGTGAAG GCGACTGGAA GGTTGCACCG
ATCCCGCCGG CACTGCATTG CCGCCGCGTG GAAATCACCG GTCCGGTCGA TGCCAAGATG
GTCATCAACG CGTTCAACTC GGGCGCGGAC AGCTACATGA CCGACTTCGA AGATTCGAAT
TCGCCGAGCT GGCACAACCA GATCCAGGGC CAGGTCAACC TGAAGGCCGC CATCCGCCGC
ACGCTCACGC TGGAGCAGAA CGGCAAGACC TACAAGCTCA ACGACAAGAT CGCCACGCTG
CAGGTGCGTC CGCGCGGCTG GCATCTGGAC GAGAAGCATG TGCTGATCGA CGGCGAGCGC
GTGTCCGGCG GCATCTTCGA CTTTGCGCTG TTCTTCTTCC ACAACGCAAA GGAGCAGATT
GCTCGCGGCG CCGGCCCGTT CTTCTATCTG CCGAAGATGG AAAGCCATCT GGAAGCGCGT
CTGTGGAACG ACATCTTCGT GATGGCGCAG AACGAGATCG GCCTTCCGCA GGGCACGATC
AAGGCCACCG TGCTGATCGA AACCATCCTC GCCGCGTTCG AGATGGAAGA AATCCTGTAC
GAACTGCGCG AGCACAGCGC AGGCCTGAAC GCCGGCCGTT GGGACTACAT CTTCTCGTGC
ATCAAGAAGT TCAAGGTCGA CAAGAACTTC TGCCTGGCCG ACCGCGCCAA GGTGACGATG
ACCTCGCCGT TCATGCGCGC CTACGCGCTG CTGCTGCTCA AGACCTGCCA CAAGCGCGGT
GCGCCCGCAA TCGGCGGCAT GAGCGCGCTG ATCCCGATCA AGAACGATCC GGAGAAGAAC
GCCATCGCCA TGGCCGGCAT CATCAACGAC AAGAAGCGCG ACGCGACCGA CGGCTACGAC
GGCGGCTGGG TGGCGCACCC GGGCCTGGTC GAGCCGGCCA TGAAGGAATT CGTGGCAGTG
CTGGGCGAGA AGCCGAACCA GTTCGAGAAG CAACGCCCGG ACGTGGAAGT GAAGGCTGCG
GACCTGCTGG ACTTCCAGCC GGAAACGCCG ATCACCGAAG GTGGCCTGCG CATGAACATC
AACGTCGGCA TCCACTACCT AGGTGCCTGG CTGGCCGGCA ACGGTTGCGT GCCTATCCAC
AACCTGATGG AAGATGCCGC CACGGCGGAA ATCTCCCGCT CCCAGGTGTG GCAGTGGATC
CGCTCGCCGA AGGGCAAGCT GGAAGACGGC ACCAAGGTCA CGGCTGAACT GGTGCGCAAG
CTGATCCCGG AAGAATTGGC CAAGGTGAAG GAGACGGGCG CGGTGGGCCA CTTTGACCGC
GCTGCAGAAA TCTTCGAACA GATGTCGACG TCGGAAGACT TTGCCGAATT CCTGACACTG
CCGCTGTACG AAGAAATCTA A
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| Protein sequence | MALTLPQGME IKAEILPAYE DILTPEALAL VAKLHRAFQP RRKELLAARV ERAKRLDAGE
RPDFLPETKA VREGDWKVAP IPPALHCRRV EITGPVDAKM VINAFNSGAD SYMTDFEDSN
SPSWHNQIQG QVNLKAAIRR TLTLEQNGKT YKLNDKIATL QVRPRGWHLD EKHVLIDGER
VSGGIFDFAL FFFHNAKEQI ARGAGPFFYL PKMESHLEAR LWNDIFVMAQ NEIGLPQGTI
KATVLIETIL AAFEMEEILY ELREHSAGLN AGRWDYIFSC IKKFKVDKNF CLADRAKVTM
TSPFMRAYAL LLLKTCHKRG APAIGGMSAL IPIKNDPEKN AIAMAGIIND KKRDATDGYD
GGWVAHPGLV EPAMKEFVAV LGEKPNQFEK QRPDVEVKAA DLLDFQPETP ITEGGLRMNI
NVGIHYLGAW LAGNGCVPIH NLMEDAATAE ISRSQVWQWI RSPKGKLEDG TKVTAELVRK
LIPEELAKVK ETGAVGHFDR AAEIFEQMST SEDFAEFLTL PLYEEI
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