Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1283 |
Symbol | |
ID | 8018928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1356643 |
End bp | 1357317 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830063 |
Product | protein of unknown function DUF1234 |
Protein accession | YP_002981244 |
Protein GI | 241662884 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0206203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.287726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GCGCACCCGC AACCACATCG GACGCACCTG TCTGGCAATG GCCGGCAGAC GCCGTCATCT TGACCGTTCC CGGTTTGCAT GGCAGTGGCC CGGGTCACTG GCAGACACGG TGGGAGCAGC GCTTCCCGGC CTGGCGCCGG GTGGAGCAGG CCGATTGGTC AACGCCCGAC TTGCCGCGCT GGTCCGCCCG TGTAGGCGAA GCGGTGCGAG CGGCGCTTGC TGAGCGTCCG CCCACGCGCA GCAAGCGCCC TGTGATTCTG GTCGCGCACA GCTTTGGCTG CCTGGCATCG TTGCATTGGG CGGTGCAGAC CAAGGAAGCC GTGGCGGCGG TGTTGCTCGT CGCGCCGGCC GATCCAGACA AATTTGGTGT GCGGGATCTG CTCCCGGGCC GCACGCTGCC GTTCCCAGCC ACCCTTATCG CCAGTCGAAA CGACCCCTGG ATGCCGCAAG GCAGCGCCAT CGACTGGGCC GCGCGGTGGG GCATCGAGTT CATTGACGCT GGCGAGGCCG GCCATATCAA CGCAGATTCC AATCTCGGCG AATGGAACGA CGGCTTGGCA ATGCTCGATC GCCTGATCGG CAGAGCAAGT GCACAGGACA CCACCCGCGA CGGCGCCGAC TGGCAAGCGC AATGGGATGT CTTACCGAGC ACCCCTTATA TCTAA
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Protein sequence | MARSAPATTS DAPVWQWPAD AVILTVPGLH GSGPGHWQTR WEQRFPAWRR VEQADWSTPD LPRWSARVGE AVRAALAERP PTRSKRPVIL VAHSFGCLAS LHWAVQTKEA VAAVLLVAPA DPDKFGVRDL LPGRTLPFPA TLIASRNDPW MPQGSAIDWA ARWGIEFIDA GEAGHINADS NLGEWNDGLA MLDRLIGRAS AQDTTRDGAD WQAQWDVLPS TPYI
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