Gene Rpic12D_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1283 
Symbol 
ID8018928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1356643 
End bp1357317 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID644830063 
Productprotein of unknown function DUF1234 
Protein accessionYP_002981244 
Protein GI241662884 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0206203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.287726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GCGCACCCGC AACCACATCG GACGCACCTG TCTGGCAATG GCCGGCAGAC 
GCCGTCATCT TGACCGTTCC CGGTTTGCAT GGCAGTGGCC CGGGTCACTG GCAGACACGG
TGGGAGCAGC GCTTCCCGGC CTGGCGCCGG GTGGAGCAGG CCGATTGGTC AACGCCCGAC
TTGCCGCGCT GGTCCGCCCG TGTAGGCGAA GCGGTGCGAG CGGCGCTTGC TGAGCGTCCG
CCCACGCGCA GCAAGCGCCC TGTGATTCTG GTCGCGCACA GCTTTGGCTG CCTGGCATCG
TTGCATTGGG CGGTGCAGAC CAAGGAAGCC GTGGCGGCGG TGTTGCTCGT CGCGCCGGCC
GATCCAGACA AATTTGGTGT GCGGGATCTG CTCCCGGGCC GCACGCTGCC GTTCCCAGCC
ACCCTTATCG CCAGTCGAAA CGACCCCTGG ATGCCGCAAG GCAGCGCCAT CGACTGGGCC
GCGCGGTGGG GCATCGAGTT CATTGACGCT GGCGAGGCCG GCCATATCAA CGCAGATTCC
AATCTCGGCG AATGGAACGA CGGCTTGGCA ATGCTCGATC GCCTGATCGG CAGAGCAAGT
GCACAGGACA CCACCCGCGA CGGCGCCGAC TGGCAAGCGC AATGGGATGT CTTACCGAGC
ACCCCTTATA TCTAA
 
Protein sequence
MARSAPATTS DAPVWQWPAD AVILTVPGLH GSGPGHWQTR WEQRFPAWRR VEQADWSTPD 
LPRWSARVGE AVRAALAERP PTRSKRPVIL VAHSFGCLAS LHWAVQTKEA VAAVLLVAPA
DPDKFGVRDL LPGRTLPFPA TLIASRNDPW MPQGSAIDWA ARWGIEFIDA GEAGHINADS
NLGEWNDGLA MLDRLIGRAS AQDTTRDGAD WQAQWDVLPS TPYI