Gene Rpic12D_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1275 
Symbol 
ID8018920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1349748 
End bp1350371 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID644830055 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_002981236 
Protein GI241662876 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR03567] FMN reductase, SsuE family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.199782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCC TGACGATTTC CGGCAGCCCT TCGGCGCAAT CGCGATCTGC GCGCCTGCTG 
GGCCACGTGC GTGCGCAGCT CGAACGCGCC GGCGAGCAGG CGGACCACCT GGACCTGCGC
AGCCTGCCAG CCGACGCGCT GCTGGGCGCG CAGGTGTCCG ACCCCGCCAT CGCCGATGCG
GTGGCCCGGG TGGAAGCGGC GGGCGTGGTG ATTCTTGCCA CGCCGGTCTA CAAGGCGGCC
TACAGCGGGC TGCTCAAGAC GTTTCTCGAT CTGCTGCCGC AGAGCGGGCT GCGCGACAAG
GTCGTGCTGC CGATTGCCAC TGGCGGCAGC CTCGCCCACA CGCTGGCAAT CGACTACGCG
CTGCGCCCCG TACTGACGGC GCTGGCGGCG CGCTCGATCC TGCCCGGCAT CTTTGCCGTC
GACTCGCAGA TCGTTGTGAC CGATGACGGC GTGACCGTCG AGCCATCGCT GCAGCAGCGC
CTGGATGACG GCGTGGAGCG CGTGCACCAG GCACTGGCGC TGGCGCGACA TCCGGCCGTG
GCGCAGGTCA TCGTTTCAAG CCGCAGCGCG GTGCGTGCCA CGTTCCAGGC CGCCGACGAA
GAACGAACGC GATGTCTGGC GTGA
 
Protein sequence
MQILTISGSP SAQSRSARLL GHVRAQLERA GEQADHLDLR SLPADALLGA QVSDPAIADA 
VARVEAAGVV ILATPVYKAA YSGLLKTFLD LLPQSGLRDK VVLPIATGGS LAHTLAIDYA
LRPVLTALAA RSILPGIFAV DSQIVVTDDG VTVEPSLQQR LDDGVERVHQ ALALARHPAV
AQVIVSSRSA VRATFQAADE ERTRCLA