Gene Rpic12D_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1241 
Symbol 
ID8018886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1314658 
End bp1315434 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID644830021 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_002981202 
Protein GI241662842 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.070109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT TCAATCAAGA GACCGTTCTG AGCGTCCATC ACTGGAATGA CTCGCTGTTC 
AGCTTCAAGA CCACGCGCGA CCAGGCGCTG CGCTTCCATA ACGGCCACTT CGTCATGATC
GGGCTGGAGG TCGAAGGCAA GCCGCTGATG CGCGCCTACA GCATCGCGAG CCCGAACTAC
GAAGAGCACC TCGAGTTCTT CAGCATCAAG GTGCAGAACG GCCCCCTGAC GTCGCGACTG
CAGCATCTGA AGGTGGGCGA CAAGCTGCTG GTGAGCAAGA AGCCGGTCGG CACGCTCGTA
CTGGATGACC TGCTACCCGG TAAGAACCTG TATTTGTTTG GCACCGGCAC CGGCCTCGCG
CCGTTCATGA GCATCATTCA GGACCCGGAC ACCTATGAGC GCTTCGAGAA GGTCGTGCTG
CTGCACGGCG TGCGCCAAGT GAGCGAGTTG GCTTATGCCG ACTTCATCAC CCGGGAATTG
CCGAACAACG AGTTCTTCGG CGATCAGGTG CGCGAAAAGC TGATCTATTA CCCCACGGTT
ACGCGCGAGC CGTTCCGCAA CATGGGCCGC CTGACGGACC TCGTCGACAG CGGCAAGCTG
TCTGTCGATA TCGGCCTGCC CCCGATGGAT CCGGCAGTCG ACCGCGCCAT GATCTGTGGC
AGCCCGGCCA TGCTGGAAGA CACCTGCAAG CTGCTCGACG CCCGCGGTTT CAAGATCTCG
CCGCGCATGG GCGAAGCGGG AGACTACGTG ATCGAGCGCG CCTTCGTCGA GAAATAA
 
Protein sequence
MSAFNQETVL SVHHWNDSLF SFKTTRDQAL RFHNGHFVMI GLEVEGKPLM RAYSIASPNY 
EEHLEFFSIK VQNGPLTSRL QHLKVGDKLL VSKKPVGTLV LDDLLPGKNL YLFGTGTGLA
PFMSIIQDPD TYERFEKVVL LHGVRQVSEL AYADFITREL PNNEFFGDQV REKLIYYPTV
TREPFRNMGR LTDLVDSGKL SVDIGLPPMD PAVDRAMICG SPAMLEDTCK LLDARGFKIS
PRMGEAGDYV IERAFVEK