6 homologs were found in PanDaTox collection
for query gene Rpic12D_1223 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_1223  hypothetical protein  100 
 
 
132 aa  276  6e-74  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1132  hypothetical protein  87.93 
 
 
116 aa  206  1e-52  Ralstonia pickettii 12J  Bacteria  normal  normal  0.600758 
 
 
-
 
NC_010508  Bcenmc03_0189  hypothetical protein  26.77 
 
 
142 aa  51.2  0.000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.910889 
 
 
-
 
NC_010524  Lcho_2230  hypothetical protein  37.18 
 
 
150 aa  50.8  0.000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_4028  putative phage tail fibre protein  41.27 
 
 
125 aa  43.9  0.0008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4030  putative phage tail fibre protein  41.27 
 
 
125 aa  43.1  0.001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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