Gene Rpic12D_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1194 
Symbol 
ID8018838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1267298 
End bp1268140 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID644829976 
Productputative lipoprotein 
Protein accessionYP_002981158 
Protein GI241662798 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG AATTCAGCCT GTACAACATC CACTGTGAAT GGGGGGAGCA CGGAGCATCC 
GCGCTGGCGC CACATTGCGA CGCCGTCATC GTCGTGGACG TGCTGTCCTT CTGCACCTGT
GTGGATGTGG CCGTGGCGCG CGGGGCACGG ATCTATCCCT ACCCATGGCG CGACGCCAGC
GCTGAAACCT TCGCGCGCCG CGCCGGTGCC ATGCTGGCGG GCTACAACCG AAGCCAGGCG
GGCTATACGC TCTCCCCGGC CTCGCTGCGT GAATTGCCAA TGGGCAGCAG CCTCGTCCTG
CCCTCGCCCA ATGGGGCCAC CCTGGCGCTC GCCACCGGAT CGACGCCGAC GTTTGCTGGC
TGCCTGCGCA ACGCGCGTGC GGTAGCTGAA GCGGCCTCGC GGCTGGGCCG ACGCGTGGCC
GTGGTGGCAT CAGGAGAGCG CTGGGCCGAC GGCAGCCTGC GCCCAGCCCT GGAAGACTGG
CTGGCCGCCG GTGCGATCGT GCACCACCTG TCGGAAACGG TGGCGGGGTT CCTGCCGCAA
GCGCTCTCGC CCGAAGCGCT CGCCGCCCGC GCGATCTATC GCGAGGCGTC GCAGACCGGC
ATGATGAAAG CGTGGCTGCT TGATTCGGTA TCGGGCCGCG AGCTGTGCGA ACGCGGCTTT
ACCGAAGACG TGACCATGGC TTCGCAAACG GATGTGAGCA ATGTCGCCCC CATGCTGGTG
GAAGGCGCGT TCCGCAACGT CAATCGCAAG ACCGAGCGCC TGCCGCAGGA CTTCTTTGGC
GCAAGCCTGC GGCCCTCGCA GGCCCCGCCG TCGCACCGCA ACTTGCCGCC GACGTCACAC
TAG
 
Protein sequence
MATEFSLYNI HCEWGEHGAS ALAPHCDAVI VVDVLSFCTC VDVAVARGAR IYPYPWRDAS 
AETFARRAGA MLAGYNRSQA GYTLSPASLR ELPMGSSLVL PSPNGATLAL ATGSTPTFAG
CLRNARAVAE AASRLGRRVA VVASGERWAD GSLRPALEDW LAAGAIVHHL SETVAGFLPQ
ALSPEALAAR AIYREASQTG MMKAWLLDSV SGRELCERGF TEDVTMASQT DVSNVAPMLV
EGAFRNVNRK TERLPQDFFG ASLRPSQAPP SHRNLPPTSH