Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1194 |
Symbol | |
ID | 8018838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1267298 |
End bp | 1268140 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829976 |
Product | putative lipoprotein |
Protein accession | YP_002981158 |
Protein GI | 241662798 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG2045] Phosphosulfolactate phosphohydrolase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACCG AATTCAGCCT GTACAACATC CACTGTGAAT GGGGGGAGCA CGGAGCATCC GCGCTGGCGC CACATTGCGA CGCCGTCATC GTCGTGGACG TGCTGTCCTT CTGCACCTGT GTGGATGTGG CCGTGGCGCG CGGGGCACGG ATCTATCCCT ACCCATGGCG CGACGCCAGC GCTGAAACCT TCGCGCGCCG CGCCGGTGCC ATGCTGGCGG GCTACAACCG AAGCCAGGCG GGCTATACGC TCTCCCCGGC CTCGCTGCGT GAATTGCCAA TGGGCAGCAG CCTCGTCCTG CCCTCGCCCA ATGGGGCCAC CCTGGCGCTC GCCACCGGAT CGACGCCGAC GTTTGCTGGC TGCCTGCGCA ACGCGCGTGC GGTAGCTGAA GCGGCCTCGC GGCTGGGCCG ACGCGTGGCC GTGGTGGCAT CAGGAGAGCG CTGGGCCGAC GGCAGCCTGC GCCCAGCCCT GGAAGACTGG CTGGCCGCCG GTGCGATCGT GCACCACCTG TCGGAAACGG TGGCGGGGTT CCTGCCGCAA GCGCTCTCGC CCGAAGCGCT CGCCGCCCGC GCGATCTATC GCGAGGCGTC GCAGACCGGC ATGATGAAAG CGTGGCTGCT TGATTCGGTA TCGGGCCGCG AGCTGTGCGA ACGCGGCTTT ACCGAAGACG TGACCATGGC TTCGCAAACG GATGTGAGCA ATGTCGCCCC CATGCTGGTG GAAGGCGCGT TCCGCAACGT CAATCGCAAG ACCGAGCGCC TGCCGCAGGA CTTCTTTGGC GCAAGCCTGC GGCCCTCGCA GGCCCCGCCG TCGCACCGCA ACTTGCCGCC GACGTCACAC TAG
|
Protein sequence | MATEFSLYNI HCEWGEHGAS ALAPHCDAVI VVDVLSFCTC VDVAVARGAR IYPYPWRDAS AETFARRAGA MLAGYNRSQA GYTLSPASLR ELPMGSSLVL PSPNGATLAL ATGSTPTFAG CLRNARAVAE AASRLGRRVA VVASGERWAD GSLRPALEDW LAAGAIVHHL SETVAGFLPQ ALSPEALAAR AIYREASQTG MMKAWLLDSV SGRELCERGF TEDVTMASQT DVSNVAPMLV EGAFRNVNRK TERLPQDFFG ASLRPSQAPP SHRNLPPTSH
|
| |