Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1187 |
Symbol | |
ID | 8018831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1257325 |
End bp | 1258173 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644829969 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002981151 |
Protein GI | 241662791 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.177015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC GCCGTCCGTT CCTGGACTTC CTCACCCACG TCGTGCTGAT TCTCGGTGTG ATCGTCGTGG CGTTTCCGGT GTACGTCGTA TTCGTCGCGT CGTCGTTGAC GGCCGAAGAC GTGCTGCAGG CGCCCATGAC GCTGATCCCC GGTCCGCATC TCATCGAAAA CTACCGCACG GTGCTCACGT CGGGCATGGG CAACTCGGCC ACGCCGGTCG GCACCATGCT CATGAACAGC CTGATCATGG CACTGGGCAT CTCGCTCGGG AAGATCGCCA TCTCCATCAT CTCGGCGTTT GCGATCGTCT ATTTCAAGTT CCCGCTGCGC AAGACGTTCT TCTGGCTCAT CTTCGTCACG CTGATGCTGC CGGTGGAAGT TCGGATCCTG CCCACGTACA AGGTGGTGTC GGACCTTGGC ATGCTGAACA GCTACGCGGG CCTGACGATT CCGATCATTG CGTCGGCCAC GGCCACGTTC CTGTTTCGGC AGTTTTTCCT GACGATTCCC GATGAATTGG CGGAAGCTGT GCGCATCGAT GGCGCCGGCC CGCTCAAGTT CTTCTGGGAC GTGGTGCTGC CGCTCTCGCG CACCAGCATC GCGGCATTGT TCGTGATCCA GTTCATCTAC GGCTGGAACC AGTATCTCTG GCCGCTGCTG ATCACGACGG AAAAGAACAT GACGCCCATT GTGCTGGGCG TGACGCAAAT GATCTCCCGC TCCGGCGATT CCGCCACCGA CTGGAACCTG CTGATGGCCA CCGTGATGCT GGCCATGTTG CCGCCAGCGG CAATCGTGAT CGGGATGCAG CGGTGGTTCG TGAAGGGCCT CGTCGAAACC GAAAAGTAA
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Protein sequence | MIERRPFLDF LTHVVLILGV IVVAFPVYVV FVASSLTAED VLQAPMTLIP GPHLIENYRT VLTSGMGNSA TPVGTMLMNS LIMALGISLG KIAISIISAF AIVYFKFPLR KTFFWLIFVT LMLPVEVRIL PTYKVVSDLG MLNSYAGLTI PIIASATATF LFRQFFLTIP DELAEAVRID GAGPLKFFWD VVLPLSRTSI AALFVIQFIY GWNQYLWPLL ITTEKNMTPI VLGVTQMISR SGDSATDWNL LMATVMLAML PPAAIVIGMQ RWFVKGLVET EK
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