Gene Rpic12D_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1153 
Symbol 
ID8018796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1219041 
End bp1219676 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content62% 
IMG OID644829934 
Producthypothetical protein 
Protein accessionYP_002981117 
Protein GI241662757 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.584457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.680719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACG ATCTCGAAGA ACAGGAACAA ATTGAGAGCC TCAAGCACTG GTGGCGTGAT 
AACGGCAACG TAGTCACATG GGTCGCCATC GTGGTGCTGC TGGCTGTGGC CGGTTGGTTT
GGCTGGAAGA ACTGGCAGCG CAAGCAGGCC GGCGAAGCGT CCGTGCTGTA CGAGCAGGTA
CAGAAGGCCG TTGATGGCAA GGATGCTGAG AAGATCAAGC GCGCCGCCAC TGACATGGAA
GACAAGTTCG GCGGCACGGC TTACGCGCAG ATGACCGCGC TGGCCGCAGC CAAGGCGCTG
TACGAAGCCA ACGATGTGGC CAGCGCCAAG GCGCAGCTGC AATGGACGGT TGATCATGCG
CGCGACGACG AATACAAGGC GCTCGCCAAG CTGCGCCTGG CTGGCCTTCT GCTCGATGAG
AAAGCCTACG ATCAGGGCAT CGCGCTAGTC TCCGGCGACG TTGCGCCGGC GTTCGCCGGG
CTTTACGCCG ATCGTCGCGG CGATCTGCTG GCCGCGCAGA ACAAGAACGA AGAAGCCCGC
GCTGCCTACA AGCTGGCGTT GGAAAAGTTC GGTCCGGCTG ACGCTTCGGC GCGCCAGATC
GTGCAGTTCA AGCTGGATGC CCTGGGCGGC GCCTGA
 
Protein sequence
MAYDLEEQEQ IESLKHWWRD NGNVVTWVAI VVLLAVAGWF GWKNWQRKQA GEASVLYEQV 
QKAVDGKDAE KIKRAATDME DKFGGTAYAQ MTALAAAKAL YEANDVASAK AQLQWTVDHA
RDDEYKALAK LRLAGLLLDE KAYDQGIALV SGDVAPAFAG LYADRRGDLL AAQNKNEEAR
AAYKLALEKF GPADASARQI VQFKLDALGG A