Gene Rpic12D_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1139 
Symbol 
ID8018782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1204282 
End bp1205256 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID644829920 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_002981103 
Protein GI241662743 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0470349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.561746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TCGTCTGCAA GACCTGGGGC CCGCCCGAAT CGCTGGTGAT CGAAACATTG 
CCGGATCTCT CGCCGGGTGC GGGCGAAGTC GTGATCGACG TGAAGGCTGC GGGGGTGAAT
TTTCCTGACG TGCTGATCAT CCAGAATAAG TACCAGTTCA AGCCGGAGCT GCCGTTTACC
CCCGGCTCGG AAGTCGCGGG CGTGGTCAAT GCAGTAGGCG AAGGCGTGTC GCACCTCAAG
GCCGGCGACC ACGTGATCGC CTTTCTTGGC CAGGGCGCGT TTGCTTCACA GGTGAAGGCA
TCGGCCAAGG TGGTGATGCC GATGCCGCCG GGCATGGCGT TCGACACCGC TGCGGCATTC
ACGCTCACGT ATGGTACGTC GCACCACGCG GTGGTCGATC GCGGGCAACT GAAGGCTGGT
GAGACGATGC TGGTGCTGGG CGCTGCGGGC GGCGTCGGGC TGGCGGCCAT CGAGATCGGC
AAGGCGATCG GCGCACGCGT GATCGCCGCA GCATCGAGCG ACGAGAAGCT GGCGGTCTGC
AAGGACCACG GCGCTGATGC GCTCATCAAC TATTCGACCG AAGACCTGCG CGAGCGCATC
AAGGAATTGA CCGACGGCAA GGGCCCGGAC GTGATCTACG ACCCGGTTGG GGGCATTTAC
GCGGAGCCGG CATTCCGCTC GATCGCCTGG CGTGGCCGCT ACCTCGTGGT CGGCTTTGCC
AATGGCGAGA TCCCCAAGAT GCCGCTAAAC CTGGCACTGC TGAAAGGCGC ATCGCTGGTT
GGCGTGTTCT GGGGCGAATT CGCACGCCGC GAGCCGAAGG CGAATTTGGC GAACATGATG
CAGATGCTCG GCTGGATGCA GGAGGGCAAG ATTCGTCCGC ACATCTCTGC GCGCTATCCG
CTGGAGCAGA CGACGCAGGC GCTGCTGGAC ATGGCGGCGC GCAAGGTGAC GGGCAAGGTG
GTGATCCAGC CTTAA
 
Protein sequence
MKAVVCKTWG PPESLVIETL PDLSPGAGEV VIDVKAAGVN FPDVLIIQNK YQFKPELPFT 
PGSEVAGVVN AVGEGVSHLK AGDHVIAFLG QGAFASQVKA SAKVVMPMPP GMAFDTAAAF
TLTYGTSHHA VVDRGQLKAG ETMLVLGAAG GVGLAAIEIG KAIGARVIAA ASSDEKLAVC
KDHGADALIN YSTEDLRERI KELTDGKGPD VIYDPVGGIY AEPAFRSIAW RGRYLVVGFA
NGEIPKMPLN LALLKGASLV GVFWGEFARR EPKANLANMM QMLGWMQEGK IRPHISARYP
LEQTTQALLD MAARKVTGKV VIQP