Gene Rpic12D_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1138 
Symbol 
ID8018781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1203101 
End bp1204207 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID644829919 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_002981102 
Protein GI241662742 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.571173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC AACTGCTGTC CCCGGTTCAG ACCGGCCGTA CGACCCTCGC CAATCGTGTC 
GTCATGGCAC CCCTTACACG CTCGCGCGCC GGCCAGCCAG GTGACGTGCC GACCGAACTG
AACGTGACTT ACTACGCGCA GCGTGCAACT GCTGGTCTGA TCGTTACGGA AGCGACGCAA
ATTTCCCGCC AGGGCCAGGG CTACGCCTGG ACGCCGGGCA TGTACACCGA CGCACAGGAA
GCGGGCTGGA AAACCGTGGT GGATGCTGTG CACGCCAAGG GCGGCCGCAT CTCGCAACAG
CTTTGGCACG TGGGCCGCAT TTCCAACACG CTGCTGCAGG AAAACGGCCA GGCTCCCGTC
GCGCCGTCAG CCATCGTCGC CAAGGGCGCG CAGAGCTTTG TCGTGCAGCC CGACGGCACG
CCCGCCAATG TGCCGACCAG CGAGCCGCGC GCTCTCGCCA CGGAAGAAAT CCCCGGTGTG
ATCGCGCAAT ACCGCCAGGC GGTGCTTCGT GCGCGCCGCG CCGGTTTCGA TTTCGTTGAA
ATCCATGCCG CCAACGGTTA CCTGCTGCAC CAATTCCTGT CGACCAACAG CAACCAGCGC
ACCGACCAAT ACGGCGGCTC GCTGGAAAAC CGCGCCCGCC TGATCCTCGA AGTGGTCGAC
ACCGCCATCG CCGAGATTGG CGCAGACCGC GTCGGCATCC GCCTGTCGCC GCACTTCGTG
GCTCACGACA TTGCCGACGA GCAAACAGAA GAAAGCGCGC TGTACCTCGC TCGCGAGTTG
ACCAAGCGCG GTATCGCCTA CCTGCACATC GCCGAACCGG ATTGGGCAGG CGGCCCCGAA
CTGAGCAACG ATTTCCGCCG CCAACTGCGC GACGCCTTCA AGGGCACGCT TATCGTGTGC
GGCCAATACA CGGCGGAAGA GGGGGAGCAG ATGATCGCTT CCGGTCTGGC TGATGCCGTG
GCGTTCGGCC GACCGTTCAT CGCCAACCCT GACCTGGTGG CGCGCTTCCG TGCCGGCGCA
TCGCTGAACA AGCCAGATCG CGAAACGTTC TACGGTGGCC AGGAAAAGGG CTATACCGAC
TATCCGACGC TCGAAGAAGC GGCCTGA
 
Protein sequence
MTQQLLSPVQ TGRTTLANRV VMAPLTRSRA GQPGDVPTEL NVTYYAQRAT AGLIVTEATQ 
ISRQGQGYAW TPGMYTDAQE AGWKTVVDAV HAKGGRISQQ LWHVGRISNT LLQENGQAPV
APSAIVAKGA QSFVVQPDGT PANVPTSEPR ALATEEIPGV IAQYRQAVLR ARRAGFDFVE
IHAANGYLLH QFLSTNSNQR TDQYGGSLEN RARLILEVVD TAIAEIGADR VGIRLSPHFV
AHDIADEQTE ESALYLAREL TKRGIAYLHI AEPDWAGGPE LSNDFRRQLR DAFKGTLIVC
GQYTAEEGEQ MIASGLADAV AFGRPFIANP DLVARFRAGA SLNKPDRETF YGGQEKGYTD
YPTLEEAA