Gene Rpic12D_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1074 
Symbol 
ID8018712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1128668 
End bp1129585 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID644829851 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002981038 
Protein GI241662678 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.444129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCA CCACGCAGCC GGCCGCCCGC CAGGCCTCCC GCTCGACCTA CCTGCCCGTG 
CGCGGACTGC GCTACCACAT CCGTGAATGG GGCGAGCCCG GTGCGCCCAT CCTGTTCCTG
TTTCACGGGT GGATGGATGT ATCAGCATCG TTCCAGTTTC TGGTCGATGC GCTGCGCGAG
CGCTGGCATA TCGTGGCGCC GGATTGGCGC GGCTACGGCC AGACCGCCCG GCCTACCGAT
GCCCCCGGCG TGGAGAGCTA CTGGTTTGCC GATTACGTGG CCGACCTCGA AGCGATCATC
GATCACTACC AGCCGGAAGG GCAGGTGACG CTGGTCGGTC ACAGCCTGGG CGCCAACGTG
GTGTGCCTGT ACGCAGGCAT CCGGCCCGAA CGCGTGCGGC GCGTGGTGGA TCTGGAGGGC
TTTGGCATGT CGGCGTCAAA GGCATCGCAG GCGCCGCGCC GCTACGCGCG ATGGCTCGAC
GAGCTGAAGG ACAAGCCGCG CCTGAACACC TACGCGACCG TCGAGGACGT CGCCGCGCGC
CTGCAGAAGA CCAATCCACG CCTGCCCGCC GACAAGGCCG CATTCCTGGC GCAGCACTGG
TCGAGCCGAA ACGCCGACGG CCGCTGGGAG ATACTCGGTG ACCCCGCGCA CAAGATCATC
GATCCCCAGC TCTATCGGCT GGATGAGGTA ATGGAAATCT GGCGCCGTGT TACCGCCCCC
GTGCTGCACG TCGAGGCAGT CGATTCGCCC ACATTAAAAG CCATTGCAGG CGACGTGCCG
CTGGCGGAAT TCAAAACCCG CTTTGCGGCG TTTCCTGATT TCCGGGAGGT GCTGATTGCG
GATGCGGGCC ACATGCTGCA TCACGATCAG CCGGAGCAGG TGGCCGCGCT GATCGAAGAG
TTCTGCTTGC AGCGCTAA
 
Protein sequence
MDSTTQPAAR QASRSTYLPV RGLRYHIREW GEPGAPILFL FHGWMDVSAS FQFLVDALRE 
RWHIVAPDWR GYGQTARPTD APGVESYWFA DYVADLEAII DHYQPEGQVT LVGHSLGANV
VCLYAGIRPE RVRRVVDLEG FGMSASKASQ APRRYARWLD ELKDKPRLNT YATVEDVAAR
LQKTNPRLPA DKAAFLAQHW SSRNADGRWE ILGDPAHKII DPQLYRLDEV MEIWRRVTAP
VLHVEAVDSP TLKAIAGDVP LAEFKTRFAA FPDFREVLIA DAGHMLHHDQ PEQVAALIEE
FCLQR