Gene Rpic12D_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1061 
Symbol 
ID8018699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1117061 
End bp1118011 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID644829838 
Productprotein of unknown function DUF403 
Protein accessionYP_002981025 
Protein GI241662665 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.823298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC GCACCGCAGA CCACCTTTTC TGGATGGCGC GCTACACTGA ACGCGCCGAG 
AACACCGCCC GCATGCTCGA CGTGAATTAC CAGACTTCCC TGATGCCGCA ATCGGCGGAA
GTCGCGGAGC AGGGCTGGTG GGCGATGCTC GATATTTCCG AACTCACGCG GGTTTTTGCC
GACCGCTACG GACTGCTTTC GCGCGACGAC GTAATTGATT TCATGGTGCG CGACATGACC
AACCCGTCGT CGATCATGAG CTGCCTGCGC GGCGCGCGCG AGAACGCCCG AGCCGTGCGC
GGCTCCCTCA CAACGGAGGT GTGGGAAACC ATCAACACCA CGTGGCTGGA TGTGCAGCGC
CTGATTGCTG AAGGTATGCT GCGCGACGAT CCATCGCAAT TCTTTGAATG GGTGAAGTTT
CGCTCGCATC TGTCGCGCGG CGTGCAGGTC GGCACCATGC TGACCGATGA CGCATTCCAC
TTCATGCGGC TGGGGACCTT CCTGGAGCGT GCCGATAACA CGGCCCGGCT GCTCGATGTG
AAGTTTCAGT CGACGCCCAC GCGCGATGAA GCGGCCGCCG AGCAGGGCGA CTTCTATCAC
TGGGCCGCCA CGCTGCGGTC GGTGTCAGGC TTCGAGGTGT ATCGCAAGAT CTATCGCAAC
GTCATTACGC CGACGCGCGT GGCTGAGCTG CTGATTCTGC GCAGCGATAT GCCGCGCTCT
CTGCTCGCCA GCATGGACGA GGTGGTCAGC ATTCTTTCGA CTGTGCGCAA TAGCCAATCG
GCGGAGACGG AGCGGCGCGC TGGTAAACTG CACGCCGACC TGCGGTACGC CCGCATCGAA
GATATCTTTT CGGTTGGCTT GCATGCCTGG CTGACCAACT TCCTGGAGCG GATCGGCGAC
CTGGGCAACG GCATCAGCCA GGATTTCCTG GTGCCGCTTG AGGTGGCCTG A
 
Protein sequence
MLSRTADHLF WMARYTERAE NTARMLDVNY QTSLMPQSAE VAEQGWWAML DISELTRVFA 
DRYGLLSRDD VIDFMVRDMT NPSSIMSCLR GARENARAVR GSLTTEVWET INTTWLDVQR
LIAEGMLRDD PSQFFEWVKF RSHLSRGVQV GTMLTDDAFH FMRLGTFLER ADNTARLLDV
KFQSTPTRDE AAAEQGDFYH WAATLRSVSG FEVYRKIYRN VITPTRVAEL LILRSDMPRS
LLASMDEVVS ILSTVRNSQS AETERRAGKL HADLRYARIE DIFSVGLHAW LTNFLERIGD
LGNGISQDFL VPLEVA