| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0971 |
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| Symbol | |
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| ID | 8018603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1024283 |
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| End bp | 1025317 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829750 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002980943 |
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| Protein GI | 241662583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.158596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGT TACGCCATCC ATTTGATGGC CGCATTCAAC AGGCCGGACG TGGCACACTC
GGCGACGCAC TCGACGGCAA GTCAGTCGCC TATGTCGAAA TCGGTGAAGA AGCCGAAGGG
CAGCGCATCG ACAATTTTCT GATGCGCGTG GCCAAGGGCG TGCCTAAAAG CCATATCTAC
CGCATCCTGC GCTCCGGCGA GGTGCGAGTC AACAAAGGCC GCATCGACGC GGAATACCGT
CTGAAACTCG GCGATCTGGT TCGTATTCCG CCGCTGCGGA TTGCCCAGCA GGTGGAAGCG
GCCCGCCCTG TGCCGGCGGC AGAATTCGCG ATCCTTCACG AAGATACGCA TCTTTTGGTG
ATCGACAAGC CCGCCGGGGT GGCCGTGCAC GGCGGCTCCG GGGTGGCCTT CGGGGTGATT
GAACAATTGC GTCAGTCGCG CCCGGACGCC AAGTTCCTGG AACTGGTGCA CCGCCTTGAC
CGCGAAACGT CTGGCGTGCT GCTGCTTGCC AAAAAACGTT CTGCACTGGT GGCGCTGCAC
GAGCAGATCC GCGAAGGCCA GTTGGACAAG CGGTACTTTG CGGCGGTGAA GGGCGTCTGG
CCGCACAAGC GACAACACAT CAAATCGCCA CTGTATAAAT ACACTACACC GGAGGGCGAG
CGCCGCGTAC GCGTGCAGGC CGATGGGCAG GCGTCGCACA CGATCTTCAA CAAGGTCGGT
GTGTTTGGCC CATACACGTT GCTGGAGGCC GAACTGAAGA CGGGGCGCAC GCACCAGATT
CGGGTGCATC TGGCGCACGC CGGTTTTCCG ATCCTGGGCG ACGACAAGTA CGGCGACTTT
GCCCTGAACA AGGCGCTATC CCGCGCGAAT GCCTCGCCGC GACTGGCGCG GATGTTCTTG
CATGCGCATC GCCTACAACT GACGCATCCG CATAGCGGTG AAGTCGTCAC GTTCAACGCT
CCGTTGCCCG CCGAATGTAC CGATTTCCTC AACGCTTTCC AGGGCCCCGA TTCCGATGCC
GCAGCAGCGC TTTGA
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| Protein sequence | MNELRHPFDG RIQQAGRGTL GDALDGKSVA YVEIGEEAEG QRIDNFLMRV AKGVPKSHIY
RILRSGEVRV NKGRIDAEYR LKLGDLVRIP PLRIAQQVEA ARPVPAAEFA ILHEDTHLLV
IDKPAGVAVH GGSGVAFGVI EQLRQSRPDA KFLELVHRLD RETSGVLLLA KKRSALVALH
EQIREGQLDK RYFAAVKGVW PHKRQHIKSP LYKYTTPEGE RRVRVQADGQ ASHTIFNKVG
VFGPYTLLEA ELKTGRTHQI RVHLAHAGFP ILGDDKYGDF ALNKALSRAN ASPRLARMFL
HAHRLQLTHP HSGEVVTFNA PLPAECTDFL NAFQGPDSDA AAAL
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