| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0939 |
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| Symbol | |
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| ID | 8018571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 986558 |
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| End bp | 987829 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644829718 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_002980911 |
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| Protein GI | 241662551 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0791917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTACC AGCTTCACGA ATTCCAGCGC GCCCTGCTCA GCCCCATGAC GGCTTGGGCC
CAGGCAACTG CCAAGACCTT CACCAACCCC CTGAGTCCGC TGTCTCTGAT GCCGGGCGCC
CAACGCTACG CTGCGGGCTA CGAACTGCTG TATCGCCTGG GCAAAGAGTA CGAAAAGCCG
GAATTCGGCA TCCGCTCCGT CAAATCCAAC GGCCGCGACA TTCCGATCGT CGAGCAGACC
ATCATCGAGA AGCCGTTCTG CCGCCTCATC CGCTTCAAGC GCTACGCCGA CGACGCCGAG
ACCATCAAGC TGCTCAAGGA TGAGCCGGTT GTGCTGGTGT GTGCGCCGCT GTCTGGCCAT
CACTCCACGC TGCTGCGCGA CACCGTGCGC ACTCTGCTGC AGGATCACAA GGTGTACGTG
ACCGACTGGA TCGACGCACG CATGGTGCCG ATCGAAGAAG GTGCGTTCCA CCTGTCGGAC
TACATCAACT ACATCCGCGA ATTCATCAAC CACATTGGCG CCGACAAACT GCACGTGATC
TCGGTGTGCC AGCCGACCGT GCCCGTCCTG GCCGCCATCT CGTTGATGGC TTCGGACGGC
GAGAAGACGC CGCGCACGAT GACCATGATG GGCGGCCCCA TCGACGCACG TAAGAGCCCG
ACCGCCGTCA ACTCGCTTGC GACGAACAAG GCGCATAGCT GGTTCGAAAA CAACGTGATC
TACACGGTGC CCGCCAACTA TCCGGGCCAC GGCCGCAAGG TGTATCCGGG CTTCCTGCAG
CACGCCGGCT TCGTGGCGAT GAACCCGGAC CGCCACCTGT CATCGCACTA CGATTACTAC
CTGAACCTGA TCGAGGGCGA CACAGAAGAC GCTGAGGCCC ACGTGCGCTT CTACGACGAG
TACAACGCCG TGCTGGACAT GGCCGCCGAG TACTACCTGG AGACCATCCG CGACGTATTC
CAGGAGTTCC ACCTGGCCAA CGGCACGTGG GTGGTGGAAG GCAAGCCGGT GCGTCCGCAG
GACATCAAGA GCACCGCGCT CTTCACCATC GAAGGTGAGC TGGACGACAT TTCCGGCAGC
GGCCAGACCG AAGCCGCGCA TGGCCTGTGC ACCGGCATCC CGAGCACGCG CAAGCAACAT
CTGACGGCGC CCAAGTGCGG GCACTACGGC ATCTTCTCGG GCCGCCGCTG GCGCGAGCAG
GTGTATCCGC AGTTGCGTGA TTTCATCCGC CGCAACGAAG AAACCGCACC GCGCATCAAG
GCCGTCGCCT GA
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| Protein sequence | MLYQLHEFQR ALLSPMTAWA QATAKTFTNP LSPLSLMPGA QRYAAGYELL YRLGKEYEKP
EFGIRSVKSN GRDIPIVEQT IIEKPFCRLI RFKRYADDAE TIKLLKDEPV VLVCAPLSGH
HSTLLRDTVR TLLQDHKVYV TDWIDARMVP IEEGAFHLSD YINYIREFIN HIGADKLHVI
SVCQPTVPVL AAISLMASDG EKTPRTMTMM GGPIDARKSP TAVNSLATNK AHSWFENNVI
YTVPANYPGH GRKVYPGFLQ HAGFVAMNPD RHLSSHYDYY LNLIEGDTED AEAHVRFYDE
YNAVLDMAAE YYLETIRDVF QEFHLANGTW VVEGKPVRPQ DIKSTALFTI EGELDDISGS
GQTEAAHGLC TGIPSTRKQH LTAPKCGHYG IFSGRRWREQ VYPQLRDFIR RNEETAPRIK
AVA
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