| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0907 |
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| Symbol | |
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| ID | 8018539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 949644 |
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| End bp | 951476 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829687 |
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| Product | ABC transporter related |
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| Protein accession | YP_002980880 |
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| Protein GI | 241662520 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.657123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC GCCGCCTGGA AAAGCTCATC GATCCGTTCC GTCCCCTGCC CGACACACAG
CCTCCGGCCA ATGTGTGGCG CTTCTACGCC TACTTCCTGC GCGAGGTGCG CGGCGTTTTT
GCGTTCCTGC TGGTCGTCGG GTTGCTGGGC GCGCTGATTG AAGTCGCGCT GTTCGACTTC
CTCGGTCGCA TCGTCGACAT GATCCAGGCA ACCCCCGGCG CGGAGTTCTT CGACCGCCAC
CGCAGCGAAC TGCTGTGGAT GGCCTTTGTG GCGCTGATCG CGCGACCGGT CATCTTCGGG
CTGCACGACG TGCTCGTGCA TCAGGTCATC AACCCCAACC TGTCGAACCT GATCCGCTGG
CAGAACCACC GCTACGTGCT CAAGCAGAGC CTCACGTTCT TCCAGAACGA CTTTGCGGGC
CGCATTGCGC AGCGCATCAT GCAGACCGGC TTTTCGCTGC GCGATTCCGC CGTGCAGGCC
GTGGACGCGC TCTGGCATGT CGTCATCTAC GCGATCAGTG CGATGGTGCT GTTCGCCAGG
GCCGACTGGT GGCTCGTTGT GCCGCTGCTG GTGTGGATTG GCTGCTACAT CGCGGCACTG
AGCTATTTCG TGCCGCGCGT GAAAGCGCGT TCGGTCATCG CCACGGAATC GCGCTCCAAA
CTGATGGGCC GCATCGTGGA CGGCTACACC AACATCACCA CGCTCAAGCT GTTTGCGCAT
ACGCAGCACG AAGAAAGCTA TGCGCGCGAC GCCATGGCCG AGCAGACGGA CAAGACCCGC
CTGTCGGGCC GCATGATCAG CGGCATGGAT TTCACCATCA CGGCCATGAA CGGCCTGTTG
ATTGTCGGCA CGTCGGCGCT CGCGCTGTGG TTGTGGAGCC AGGGCCGTGT GAGCGCCGGC
ACCATTGCGC TGACCACGGG GCTGGTGATC CGCATCAACA ACATGTCGGG CTGGATCATG
TGGGTGGTCA ACGGCATCTT TGAAAACGTC GGTCAGGTGC AGGACGGCAT GCAGACCATT
GCGCTGCCGC GCGCGGTGAT CGACGAGCCC GATGCCAAGC CGCTGCGCGT GACGCGGGGC
GAAGTGCGCT TCGAGCACGT GGGCTTTCAT TACGGCAAGG GCAGCGGCGT GATCGAAGGG
TTGGACCTCG TGGTGCGCCC GGGCGAACGG ATCGGGCTGG TCGGCCCGTC GGGCGCGGGC
AAATCGACGC TGGTCAACCT GCTGCTGCGT CTGTACGACG TGGAGCGAGG CCGGATTCTG
GTCGACGGTC AGGATATTGC GACCGTGACG CAAGAAAGCC TGCGCGAGCA GATCGGCATG
GTCACGCAGG ACACGTCGCT GCTGCACCGG TCAATTCGCG ACAACCTGCG CTACGGCAAA
CCCGACAGCA CCGAGGCGGA ATTGATGCAA GCCGTGCACA GGGCCCGCGC CGACGAGTTC
ATCCCGCAGC TGTCCGATGC GCAAGGGCGG CGCGGCTTCG ATGCGTTGGT TGGGGAACGT
GGCGTGAAGC TGTCGGGCGG TCAGCGGCAG CGCATTGCGA TTGCGCGCGT GCTGCTGAAG
GACGCGCCGA TCCTGATTCT GGACGAAGCC ACGTCAGCGC TGGATTCGGA AGTGGAAGCG
GCCATCCAGG AAAGCCTGGA AACGCTGATG CAGGGCAAGA CCGTGATAGC CATTGCGCAC
CGGCTCTCGA CCATCGCGCG CATGGACCGG CTGGTCGTGC TCGACGGCGG CCGCATCGTC
GAGAGCGGCA CGCACGCCGA GTTGCTGGAA CACGGCGGCC TGTATGCGCG GCTGTGGGCG
CACCAGACCG GCGGTTTCGT TGGGGTGGAC TGA
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| Protein sequence | MLLRRLEKLI DPFRPLPDTQ PPANVWRFYA YFLREVRGVF AFLLVVGLLG ALIEVALFDF
LGRIVDMIQA TPGAEFFDRH RSELLWMAFV ALIARPVIFG LHDVLVHQVI NPNLSNLIRW
QNHRYVLKQS LTFFQNDFAG RIAQRIMQTG FSLRDSAVQA VDALWHVVIY AISAMVLFAR
ADWWLVVPLL VWIGCYIAAL SYFVPRVKAR SVIATESRSK LMGRIVDGYT NITTLKLFAH
TQHEESYARD AMAEQTDKTR LSGRMISGMD FTITAMNGLL IVGTSALALW LWSQGRVSAG
TIALTTGLVI RINNMSGWIM WVVNGIFENV GQVQDGMQTI ALPRAVIDEP DAKPLRVTRG
EVRFEHVGFH YGKGSGVIEG LDLVVRPGER IGLVGPSGAG KSTLVNLLLR LYDVERGRIL
VDGQDIATVT QESLREQIGM VTQDTSLLHR SIRDNLRYGK PDSTEAELMQ AVHRARADEF
IPQLSDAQGR RGFDALVGER GVKLSGGQRQ RIAIARVLLK DAPILILDEA TSALDSEVEA
AIQESLETLM QGKTVIAIAH RLSTIARMDR LVVLDGGRIV ESGTHAELLE HGGLYARLWA
HQTGGFVGVD
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