| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0894 |
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| Symbol | |
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| ID | 8018525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 933048 |
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| End bp | 934931 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644829673 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002980867 |
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| Protein GI | 241662507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.923334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC CTCAAGACGG CAGCGGCGCC ATTGCGCACG CTGAAACCAT CAACACCAAT
ACCGAAAACC TCATCGCCGA AACCGCGACC CGTGCCAGCG CCTTTGCTGC ACTGGGCCTG
GACGACCGCA TCGTCCGCGC GCTTGGTGAA GTGAACTACA CCACGCCCAC GCCGGTGCAG
GCGCAAGCCA TTCCGGCCTG CCTGTCCGGC CGCGACCTGC TGGTCACGAG CCAGACTGGT
TCGGGCAAGA CCGCCGCGTT CATCCTGCCG GCCATCCAGC GCATCAGCGA GCAGCCTGAG
CCGCAGCGTC CGCGCATGGA CGGCCCGCCG CAACGCATGA AGGGCCGTCG CCCTCGCCCG
GCGCCGGCCA AGCCGTCGCT GCTGGTGCTG ACGCCCACGC GTGAACTGGC CCTGCAAGTG
ACCACCGCCA CCGCACAGTA CGGCCGCCAC CTGCGCCGTA TCGTCTGCGC GAGCATCCTG
GGCGGCATGC CGTACCCGAA GCAGCTCGAC ATGCTGGCCC GCATGCCGGA CATCATCATC
GCCACGCCGG GCCGCCTGCT CGACCACATC GACTCGGGCC GCATCGACCT GTCGGCACTC
GACATGCTCG TCTTTGACGA AGCCGACCGC ATGCTGGACA TGGGCTTCTC GGATGACATC
GAAGCCATCG TCGGCGCTAC GCCGGCCACG CGCCAGATGC TGATGTTCTC GGCCACCATG
GACCGCCGCA TCGAGCAGTT GGCCGAGCGC ATGATGCGCG AGCCGCAGCG CATCGAAATC
GCCGCCGCCA AGGTCGACCA GAGCAACATC GAAGAGCGCC TGCACTTCAC CGACGACATG
TCGCACAAGC AGCAGCTGCT GGATCACCTG TTGCGCGATG CATCGCTCAA GCAAGCCATC
GTCTTCACGG CGACCAAGCG TGATGCCGAT TCGCTGGCCG AACGCCTGAC CGAGCACGGC
TTCTCCGCCG GCGCCTTGCA TGGCGACATG CACCAGGGCG CGCGCAACCG CACGCTGACG
GCGCTGCGCC GCGGCCAGTT GCGCGTGCTG GTGGCCACCG ACGTGGCAGC GCGCGGCATC
GACGTGCCGG ACATCACGCA CGTGGTCAAC TTTGACCTGC CCAAGCAAGC GGAAGACTAT
GTGCACCGCA TCGGCCGTAC GGGCCGCGCG GGCCGCAGCG GCATCGCCAT CAACCTGGTG
AACCACAACG ACACGTTCCA ATGGCGCCGT ATCGAGCGCT TCGTTGATCG CCGCATCGAC
GCATCGGTGG TTGAGGGCCT GGAGCCGAAG CGCTCGGCCA AGCCCCGCAC TGGTGGCCCG
CGTGCCGGCG GCGACCGTGG CGGCTACCGC GGAAACGGTG GCAATGGCGG CGGTTATCGC
GGCCAGCGTG AAGGCTACGG CGCACGCCAA GGCGGCAACG GTGGCAATAG CGGCAACAAC
GAAGGCCGCT TCCAACGCAG CTTCGCTGGC GACCGCGACG GCTTTGCTCC GCGCCGCGAC
GACCGCAATG GCAACAGCAA TAGCAACAGC GGCGGCTACC AAGGCGCCCA ACGCGAATGG
AACCGCGACG ACCGCGCCCC GCGTCCGTCG TATGGCCAAG GCCAGCAAAA CCGTGGCGAC
TGGCAGCAAC GCCCCGCGCG CACGCAAGGC ACGCAAGACG GCAACCGTGG CTACGGCAAC
AGCGCCGGCA CCGGCAACGG TGGCGGTTAT GGCAATCGCG ATGGCAACCG TGAAGGCGCC
GCCCCGCGTC GCTTCGGCGA CAACAACAGC GGCAACCGCT TCGGCGACGC TGGCAACGGC
GCACAGCGTC GCAGCTATGG CAATCGCGAC GGCAACCGCG ACAGCTACGG CAGCAAGGGC
CGTTCGCGCG ACTTCGATCG TTGA
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| Protein sequence | MTQPQDGSGA IAHAETINTN TENLIAETAT RASAFAALGL DDRIVRALGE VNYTTPTPVQ
AQAIPACLSG RDLLVTSQTG SGKTAAFILP AIQRISEQPE PQRPRMDGPP QRMKGRRPRP
APAKPSLLVL TPTRELALQV TTATAQYGRH LRRIVCASIL GGMPYPKQLD MLARMPDIII
ATPGRLLDHI DSGRIDLSAL DMLVFDEADR MLDMGFSDDI EAIVGATPAT RQMLMFSATM
DRRIEQLAER MMREPQRIEI AAAKVDQSNI EERLHFTDDM SHKQQLLDHL LRDASLKQAI
VFTATKRDAD SLAERLTEHG FSAGALHGDM HQGARNRTLT ALRRGQLRVL VATDVAARGI
DVPDITHVVN FDLPKQAEDY VHRIGRTGRA GRSGIAINLV NHNDTFQWRR IERFVDRRID
ASVVEGLEPK RSAKPRTGGP RAGGDRGGYR GNGGNGGGYR GQREGYGARQ GGNGGNSGNN
EGRFQRSFAG DRDGFAPRRD DRNGNSNSNS GGYQGAQREW NRDDRAPRPS YGQGQQNRGD
WQQRPARTQG TQDGNRGYGN SAGTGNGGGY GNRDGNREGA APRRFGDNNS GNRFGDAGNG
AQRRSYGNRD GNRDSYGSKG RSRDFDR
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