Gene Rpic12D_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0862 
Symbol 
ID8018493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp903596 
End bp904249 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID644829641 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002980835 
Protein GI241662475 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0565276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.49182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCTG ACCTGACCGA TCTGTTCCTG CCGGCCTTCT GGGAAACGCT GGCCATGGTG 
GGCGTGTCAG GCGGCATTGG CGCGCTGTTT GGCGTACCGC TCGGCGTACT GCTGTACCTG
ACGACTTCGG GCGGCGTGCT GTCCGCGCCA GTGTTCAATC GCGTGGCAGG CCTTGTCGTC
AATGCCGTGC GCTCGGTGCC GTTCATCATT CTGCTGGTCG CCGTGATTCC GTTCACCCGC
CTGCTGGCGG GCTCGTCCAT TGGCACCGCG GCGGCCATCG TGCCGCTGAC GATTGCTGCG
ATTCCGTTTG TTGCACGTCT GGTTGAGACT GCGCTGCGCG AAGTGGATCG TGGCCTGATC
GAAGCCGCGC AGTCCATGGG TGCGACGACT GGTCAGCTGG TCTACAAGGT GCTGCTGCCG
GAAGCGATGC CGGGCATCCT CGCCGGCCTG ACGATCACCT TCGTCAGCCT TGTCGGCTAC
TCGGCCATGG CCGGTACCAT CGGCGGCGGC GGCCTCGGCG ACCTGGGCAT CCGCTACGGC
TATCAGCGCT ACGAATCGGA CATCATGCTG GCGGTTGTCG TCATCCTGAT CGTCTTCGTG
CAGGCGGTGC AATCGACGGG CGATTGGCTC GTGCGCCGCC TGAGCCACCG TTAA
 
Protein sequence
MWSDLTDLFL PAFWETLAMV GVSGGIGALF GVPLGVLLYL TTSGGVLSAP VFNRVAGLVV 
NAVRSVPFII LLVAVIPFTR LLAGSSIGTA AAIVPLTIAA IPFVARLVET ALREVDRGLI
EAAQSMGATT GQLVYKVLLP EAMPGILAGL TITFVSLVGY SAMAGTIGGG GLGDLGIRYG
YQRYESDIML AVVVILIVFV QAVQSTGDWL VRRLSHR