| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0838 |
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| Symbol | |
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| ID | 8018469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 877791 |
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| End bp | 878477 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829617 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_002980811 |
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| Protein GI | 241662451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.681144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.099255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCC GGTTTCCCGA TCCGCTGGGC GCGGTGCTGT TCGATCTGGA CGGCACGCTG
GCTGACACGG CTCCCGATTT GGCCGCGGCG GCCAACAAGG TGCGCACTGA CCGCGGCCTC
GAGCCGGTCG ACTACGAAGC GCTTCGCCCG GTGGCCTCGC ATGGTGCGCG CGGGCTGATT
GGCGTGGCCT TCGGCGTTGG GCCGGGGGAC GCGGAGTTCG AAACGCTGCG ACTGGCATTT
CTCGCCAACT ACGAGGCGGA AATCTGCGTG CGTACACAGC TGTTTCCGGG CATGGCAGAC
GTGCTGGCCG AACTGGGCCG TGCCGGTATT CCCTGGGGGA TCGTCACCAA CAAGTCGGGC
CGACTGACGG TACCGTTGGT TGCACAGTTG CCGTTGCCGG TGCCGCCGGC GTGCGTCGTT
GCGGGCGACA CGACGCCGCA CGCCAAGCCC CACCCTGCCC CGCTGCTGCA TGCGGCCGAC
TCCATCGGCG TCGATGCACG GCAGATCGTC TACGTGGGCG ACGACCTTCG CGACATTGAA
GCCGGCCGCG CCGCCGGCAT GCCTACCATT GCGGCCAGTT ACGGCTATTG TGGTAATGGA
CCATCGCCCG TGGAATGGCG CGCCGATGCG CTGATTGCCA GCGCGGCCGA GCTGATTCCG
CTGCTGCTCG AATCGAAACG CGCTTGA
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| Protein sequence | MARRFPDPLG AVLFDLDGTL ADTAPDLAAA ANKVRTDRGL EPVDYEALRP VASHGARGLI
GVAFGVGPGD AEFETLRLAF LANYEAEICV RTQLFPGMAD VLAELGRAGI PWGIVTNKSG
RLTVPLVAQL PLPVPPACVV AGDTTPHAKP HPAPLLHAAD SIGVDARQIV YVGDDLRDIE
AGRAAGMPTI AASYGYCGNG PSPVEWRADA LIASAAELIP LLLESKRA
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