Gene Rpic12D_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0816 
Symbol 
ID8018446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp848317 
End bp849366 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID644829595 
Productpurine nucleoside permease 
Protein accessionYP_002980789 
Protein GI241662429 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG5042] Purine nucleoside permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT CCCGACTCAA GATGCCCATG CCGCGTTTGC GTACGATCGC CAAGCTCTGC 
GCCGTCGGTG CCGCAGCGCT GACCTTGAAC AGCTGCGCGT ATGACGGAGT GAAAGTCATC
GTCATCAACA TGTTCCAGGG CGAGGCACAG CCGTTCATCG ACCGCTACGA CCTCAAGGAG
AAGGTCTACA TTTCCGGCTT GTCGCCCGAC GCCCCGAACA TGCTGTGCAA CTACGACGGC
ATCTGCCAGG TCACCACGGG CATGGGCTAT GCGAATGCCG CGTCGACGAT TTCCGCGCTG
CTCTATCGCA GCAAGCTGGA CCTCTCGCAC ACGTACTTTG TGATTGCCGG CATTGCGGGC
ATCGACCCGG GGCAGGGGAC GGTGGGCTCG GCGGCGTGGG CGCGGTATGC GGTCGATTAC
GGCCTTTCGC ACGAGATCGA TGCGCGCGAG ATGCCGGCCG GCTGGCCGTA CGGCTACTTC
GGCATCGGCA CCAAAGGCCC CGGCGAGAAG CCGCCGATGG ACTACCGCAC CGAAGTGTTC
CAGCTCAACG AGACGCTGCT GCAGAAGGCC TACACGCTGT CGAAATCGGC GACGCTGGAA
GACAGCCCCG AGGCCATCGC CTTCCGCAAG AACTACGCGT ATGCGCCGGC CAACCAGCCG
CCCGCCGTCA TCCAGTGCGA CGTGGCTTCC GCCGATACAT GGTGGGCCGG CCGCAACCTC
GGGCAGCGGG CGCGTGACTG GGTGAAGACG ATGACCGACA ACAAGGGCAA CTACTGCACG
ACGGCGCAAG AAGACAACGC TACGCTGGAA GTCCTGACGC GCGGCGCCCG TGCCGGCAAG
GTCGATTTCA GCCGTGTGGC ATTGCTGCGT GCCGGGTCCG ACTTCGATCG CCCATACGAC
GGCCAGAGCG CCTCCGACGG GCTCATCAAC TACGCGCAGC AGGGCGGCTT TGTGCCGGCC
ACGCACAACC TCGTCAATGC GGCCAAGCCG TTATTGGACG ACATCGTGCA GCACTGGCCC
CAGTGGAAAC AGGGGGTGCC GACGAATTAA
 
Protein sequence
MIDSRLKMPM PRLRTIAKLC AVGAAALTLN SCAYDGVKVI VINMFQGEAQ PFIDRYDLKE 
KVYISGLSPD APNMLCNYDG ICQVTTGMGY ANAASTISAL LYRSKLDLSH TYFVIAGIAG
IDPGQGTVGS AAWARYAVDY GLSHEIDARE MPAGWPYGYF GIGTKGPGEK PPMDYRTEVF
QLNETLLQKA YTLSKSATLE DSPEAIAFRK NYAYAPANQP PAVIQCDVAS ADTWWAGRNL
GQRARDWVKT MTDNKGNYCT TAQEDNATLE VLTRGARAGK VDFSRVALLR AGSDFDRPYD
GQSASDGLIN YAQQGGFVPA THNLVNAAKP LLDDIVQHWP QWKQGVPTN