| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0713 |
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| Symbol | |
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| ID | 8018340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 745870 |
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| End bp | 746514 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644829489 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_002980686 |
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| Protein GI | 241662326 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.687986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAT TGGTTCGCGG TTCTCTTTTC GCCCTGTGGT TTCGCAAAGT CGTTCAGGCT
CACCCGAGCT TGGCATCGGC ACGACTGCGC CATTCGCGCG CACTACAAGG CCATTTGGGC
AGCTCGCCTA TTGTCACGAC ACTATCGGCA ACTCGCGGGT TCACGCTGAG CGAGCTAATG
GTTGTCTTGG CGATTCTCGC CATTCTCTTG GTGGTCGCGA TCCCGTCTTT CGCACCGATG
CTGCGTAGCA ATCGTGTTTT TGCTGTGCAA ACTGAGGTCA TGTCCTCGCT CGCTTTGGCG
CGAAGCGAGG CCGCCAAACG CGGCATTCCA GTGAGCGTGG TCTTGTCAGG CGCGTCTGGA
GTGGCAGGTA ACGAATGGGG CGCGGGTTGG TCTGTCTGGG TGGATTTAAA TGCCAACGGG
GTGGTTGATG GAGGGGAGGT GTTGCGTGCA CACGATCCCT TGCCACCTGG GTTTACGCTG
AGCGTGCCGA ACAACGGCGC TCTCAAGTTC GATGCTCATG GTTTTCTGTC GCCGGCTGTG
CTGCGCCAAT TGAAGGTGTG TTCCACCGCC AGCGGGACGT CGGGATATCA GATCACGATT
CAGCCGAACG GACTGGTCGA CTCTGCCAGC GCAACGTGTC CATGA
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| Protein sequence | MRALVRGSLF ALWFRKVVQA HPSLASARLR HSRALQGHLG SSPIVTTLSA TRGFTLSELM
VVLAILAILL VVAIPSFAPM LRSNRVFAVQ TEVMSSLALA RSEAAKRGIP VSVVLSGASG
VAGNEWGAGW SVWVDLNANG VVDGGEVLRA HDPLPPGFTL SVPNNGALKF DAHGFLSPAV
LRQLKVCSTA SGTSGYQITI QPNGLVDSAS ATCP
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