Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0694 |
Symbol | |
ID | 8018320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 724069 |
End bp | 725916 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829469 |
Product | Relaxase |
Protein accession | YP_002980667 |
Protein GI | 241662307 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCGC TGTTCCAACG CAAACGGGTG TCGCCTGCCG CCAGTGCGCC AACGCCCAAA CCTCCCGCCG AGCCCGGCAA AGGGCTGATG CGGCCGGAGC CGGCCGCATC GCTGCTGGCG GCACCGCGCC GACAGAAGCT GCTGGAACAC ATCTGGCAGC GCACCTCGCT GTCGCGCCGG CAGTTCGTCA CGCTGTACCT CGCCCCGCTG GAACGCTACG CCGAGCTGGT CCAGCAATTC CCCGCGTCGG AGGCCCATCA CCACGCCTAT CCGGGCGGCA TGCTGGACCA CGGCCTGGAG ATCGTCGCCT ACGCGCTCAA GCTGCGGCAG TCGCATCTGC TGCCCGCCGG CGCCACGCCG GAGACGCAAG CCGCCCAGGC CGAGGCCTGG ACCGCAGGCA CCGCCTACGC GGCGCTGCTG CACGACATCG GCAAGATCGC GGTCGACCTG CACGTCGAGT ACGCAGACGG CACGGTCTGG CACCCCTGGC ACGGCCCGCT GCGGCGGCCG TACCGCTTCC GCTACCGCAG GGAGCGCGAA TACCGGCTGC ACAGCGCCGC CACCGGGCTG CTCTACGCCC GGCTGCTCGA TCCGGGCATC TTCGACTGGC TCGCCGGCTA TCCCGACCTC TGGGCCGCGC TGCTGTACGT GCTGGCCGGC CAGTACGAGC ATGCCGGCAT GCTCGGAGAA CTGGTCGTGC AGGCGGACCA GGCATCGGTC GCCCAGGAAC TCGGCGGCGA TCCGAGCAAG GCCCTGGCAG CGCCCCGGCA CGCACTGCAG CGCAAGCTGC TCGATGGCCT GCGCTACCTC CTGAAGGAAG AGTTCAAGCT GAACCAACCC CAGGCCTCGG ATGGCTGGCT GACCCAGGAC GCGCTCTGGC TGGTGAGCAA GACCGTCTCG GACAAGTTGC GCGCGCATCT GCTGTCGCAG GGCATCGACG GCATCCCGGC CAGCAACACG GCGGTGTTCA ACGTGCTGCA GGATCACGGC ATCGCCTTGG CCACACCGGA CGGCAAGGCG ATCTGGAAGG CCACCGTCAC CAGCGATGCC GGCTGGTCGC ACAGCTTCAC CTTCCTGAAG CTGTCTCCGG CCATGGTCTG GGATGCGGCA GACCGGCCGG CACCGTTCGC GGGTCGCGTG CAGGCTGACG AGGAACCAGG GGCGCCGACG CCACAGGCAC CGGCAGCCGA AGCGCCGGGC TTGGAAAGCG CCGATACCGT GCCACCGAGC ACCGCGCCGA CCGCGCCCGT GCCCGCCGAC AACGGCGTGG CCGCGCTGCT CGATCTGCTG AGTGACACGG CCCCACCCGT AGCGCCGGAG GCTCCGAGCG ACCCCGAGCC GGCCTCGCCA CCGGCGCCTA CGGTGCTGCC GCAGGTGAGC CCCGCGCCAT CCCAGGATCG GCCGGAGCCT TCCGGCGAGC ATTTCATGGC CTGGCTGCGT CAGGGTATCC AGACGCACAA GCTCATCATC AACGACGCCA AAGCCTTGGT GCATAGCGTC GTGGGAACGG CCTACTTGGT GAGCCCCGGC GTCTTCCAGC GCTATGCGCA AGAACATCTG CAAATTGCCG CACTGGCGAA ACCGGAGAAC CTGGAGGGAT GGCAGTGGGT GCAGAAGCGT TTTGAGAAGC TGGGCCTGCA CCGCAAGCAA GCAAGCGGGC TGAATATCTG GACCTGCGAA GTCACGGGGC CGCGCAAATC CAGGCGACTG CACGGCTACC TGCTGAGCGC TCCCGAAGCG CTGTTCCAGG AAATGCCTCC GGACAATCCA TACCTGCGCC TCCTCACCGA GGCCGTAAAG CGCGAAAATT CAGCCGCCGG TAATAAGAAC GACAACGAAC AGGGGTAG
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Protein sequence | MLSLFQRKRV SPAASAPTPK PPAEPGKGLM RPEPAASLLA APRRQKLLEH IWQRTSLSRR QFVTLYLAPL ERYAELVQQF PASEAHHHAY PGGMLDHGLE IVAYALKLRQ SHLLPAGATP ETQAAQAEAW TAGTAYAALL HDIGKIAVDL HVEYADGTVW HPWHGPLRRP YRFRYRRERE YRLHSAATGL LYARLLDPGI FDWLAGYPDL WAALLYVLAG QYEHAGMLGE LVVQADQASV AQELGGDPSK ALAAPRHALQ RKLLDGLRYL LKEEFKLNQP QASDGWLTQD ALWLVSKTVS DKLRAHLLSQ GIDGIPASNT AVFNVLQDHG IALATPDGKA IWKATVTSDA GWSHSFTFLK LSPAMVWDAA DRPAPFAGRV QADEEPGAPT PQAPAAEAPG LESADTVPPS TAPTAPVPAD NGVAALLDLL SDTAPPVAPE APSDPEPASP PAPTVLPQVS PAPSQDRPEP SGEHFMAWLR QGIQTHKLII NDAKALVHSV VGTAYLVSPG VFQRYAQEHL QIAALAKPEN LEGWQWVQKR FEKLGLHRKQ ASGLNIWTCE VTGPRKSRRL HGYLLSAPEA LFQEMPPDNP YLRLLTEAVK RENSAAGNKN DNEQG
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