Gene Rpic12D_0694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0694 
Symbol 
ID8018320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp724069 
End bp725916 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content68% 
IMG OID644829469 
ProductRelaxase 
Protein accessionYP_002980667 
Protein GI241662307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGC TGTTCCAACG CAAACGGGTG TCGCCTGCCG CCAGTGCGCC AACGCCCAAA 
CCTCCCGCCG AGCCCGGCAA AGGGCTGATG CGGCCGGAGC CGGCCGCATC GCTGCTGGCG
GCACCGCGCC GACAGAAGCT GCTGGAACAC ATCTGGCAGC GCACCTCGCT GTCGCGCCGG
CAGTTCGTCA CGCTGTACCT CGCCCCGCTG GAACGCTACG CCGAGCTGGT CCAGCAATTC
CCCGCGTCGG AGGCCCATCA CCACGCCTAT CCGGGCGGCA TGCTGGACCA CGGCCTGGAG
ATCGTCGCCT ACGCGCTCAA GCTGCGGCAG TCGCATCTGC TGCCCGCCGG CGCCACGCCG
GAGACGCAAG CCGCCCAGGC CGAGGCCTGG ACCGCAGGCA CCGCCTACGC GGCGCTGCTG
CACGACATCG GCAAGATCGC GGTCGACCTG CACGTCGAGT ACGCAGACGG CACGGTCTGG
CACCCCTGGC ACGGCCCGCT GCGGCGGCCG TACCGCTTCC GCTACCGCAG GGAGCGCGAA
TACCGGCTGC ACAGCGCCGC CACCGGGCTG CTCTACGCCC GGCTGCTCGA TCCGGGCATC
TTCGACTGGC TCGCCGGCTA TCCCGACCTC TGGGCCGCGC TGCTGTACGT GCTGGCCGGC
CAGTACGAGC ATGCCGGCAT GCTCGGAGAA CTGGTCGTGC AGGCGGACCA GGCATCGGTC
GCCCAGGAAC TCGGCGGCGA TCCGAGCAAG GCCCTGGCAG CGCCCCGGCA CGCACTGCAG
CGCAAGCTGC TCGATGGCCT GCGCTACCTC CTGAAGGAAG AGTTCAAGCT GAACCAACCC
CAGGCCTCGG ATGGCTGGCT GACCCAGGAC GCGCTCTGGC TGGTGAGCAA GACCGTCTCG
GACAAGTTGC GCGCGCATCT GCTGTCGCAG GGCATCGACG GCATCCCGGC CAGCAACACG
GCGGTGTTCA ACGTGCTGCA GGATCACGGC ATCGCCTTGG CCACACCGGA CGGCAAGGCG
ATCTGGAAGG CCACCGTCAC CAGCGATGCC GGCTGGTCGC ACAGCTTCAC CTTCCTGAAG
CTGTCTCCGG CCATGGTCTG GGATGCGGCA GACCGGCCGG CACCGTTCGC GGGTCGCGTG
CAGGCTGACG AGGAACCAGG GGCGCCGACG CCACAGGCAC CGGCAGCCGA AGCGCCGGGC
TTGGAAAGCG CCGATACCGT GCCACCGAGC ACCGCGCCGA CCGCGCCCGT GCCCGCCGAC
AACGGCGTGG CCGCGCTGCT CGATCTGCTG AGTGACACGG CCCCACCCGT AGCGCCGGAG
GCTCCGAGCG ACCCCGAGCC GGCCTCGCCA CCGGCGCCTA CGGTGCTGCC GCAGGTGAGC
CCCGCGCCAT CCCAGGATCG GCCGGAGCCT TCCGGCGAGC ATTTCATGGC CTGGCTGCGT
CAGGGTATCC AGACGCACAA GCTCATCATC AACGACGCCA AAGCCTTGGT GCATAGCGTC
GTGGGAACGG CCTACTTGGT GAGCCCCGGC GTCTTCCAGC GCTATGCGCA AGAACATCTG
CAAATTGCCG CACTGGCGAA ACCGGAGAAC CTGGAGGGAT GGCAGTGGGT GCAGAAGCGT
TTTGAGAAGC TGGGCCTGCA CCGCAAGCAA GCAAGCGGGC TGAATATCTG GACCTGCGAA
GTCACGGGGC CGCGCAAATC CAGGCGACTG CACGGCTACC TGCTGAGCGC TCCCGAAGCG
CTGTTCCAGG AAATGCCTCC GGACAATCCA TACCTGCGCC TCCTCACCGA GGCCGTAAAG
CGCGAAAATT CAGCCGCCGG TAATAAGAAC GACAACGAAC AGGGGTAG
 
Protein sequence
MLSLFQRKRV SPAASAPTPK PPAEPGKGLM RPEPAASLLA APRRQKLLEH IWQRTSLSRR 
QFVTLYLAPL ERYAELVQQF PASEAHHHAY PGGMLDHGLE IVAYALKLRQ SHLLPAGATP
ETQAAQAEAW TAGTAYAALL HDIGKIAVDL HVEYADGTVW HPWHGPLRRP YRFRYRRERE
YRLHSAATGL LYARLLDPGI FDWLAGYPDL WAALLYVLAG QYEHAGMLGE LVVQADQASV
AQELGGDPSK ALAAPRHALQ RKLLDGLRYL LKEEFKLNQP QASDGWLTQD ALWLVSKTVS
DKLRAHLLSQ GIDGIPASNT AVFNVLQDHG IALATPDGKA IWKATVTSDA GWSHSFTFLK
LSPAMVWDAA DRPAPFAGRV QADEEPGAPT PQAPAAEAPG LESADTVPPS TAPTAPVPAD
NGVAALLDLL SDTAPPVAPE APSDPEPASP PAPTVLPQVS PAPSQDRPEP SGEHFMAWLR
QGIQTHKLII NDAKALVHSV VGTAYLVSPG VFQRYAQEHL QIAALAKPEN LEGWQWVQKR
FEKLGLHRKQ ASGLNIWTCE VTGPRKSRRL HGYLLSAPEA LFQEMPPDNP YLRLLTEAVK
RENSAAGNKN DNEQG