| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0683 |
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| Symbol | |
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| ID | 8018309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 713332 |
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| End bp | 716214 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644829458 |
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| Product | hypothetical protein |
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| Protein accession | YP_002980656 |
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| Protein GI | 241662296 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.439939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGT CGTTGCCCTG GGCACGCAAG GTCGCCACGC CTGCCGGCCC CAGCCTGGAG
GCCGATGACG CCTGGTCGCA GCATGTCTCG ACGCTGGCCG CGCACGGTGT TCCCGAGCCC
GGCAGCGCGG TGGGCGGCCA GCCGCGCCGG CCGGCCACCG AGGCGGACCT GCAGGCACTC
TACGGCGTGG CGCCGTCCTT CGCCGACCTG CTCCCCTGGG TGGAGTATCT GCCCGACTCC
AAGAGCGTGC TGCTGGAAGA CGGCCAGTCG GTGGCGGCCT TCTTCGAGCT GGCGCCGGTC
GGCACCGAGG GCCGCGAGAT GGCCTGGCTG TGGCAGGCGC GCGATGCGTT GGAGAACGCG
CTGCAGGACT CGTTCGACGA ACTCGACGAG AACCCCTGGG TGGTGCAGCT CTACGCCCAG
GACGAAGCAA CCTGGGACAA CTACCTGCGC GGGCTCACGA ACTACGTGCG GCCGCGCGCG
CAAGGCAGCG CCTTCACGGA CTTCTACCTG CGCTTCTTCG GGCATCACCT GCGCGCCATC
GCCAAGCCCG GCGGCCTGTT CGAGGACACG ACGGTGACGC GCCTGCCGTG GCGCGGCCAG
GTGCGGCGCG TGCGCATGGT GGTCTACCGG CGCGCGAGTG CGTCTGGCGC GTCCCGGCGC
GGCCAGTCGC CCGAGCAGGC GCTGACGACG ATCTGCGACC GGCTCGCAGG TGGCCTCGCC
AATGCGGGCG TGAAGGCCCG GCGCATGGAG GCGCACGACA TCCACGACTG GCTGCTGCGC
TGGTTCAATC CGCACCCCAC CATGCTTGGC CCTGCCGCCG ACGACCGCGA GTGCTTCTAC
GCGCTGACCC GCTACCCCGA GGAAGCCGAG CAAGGCGAGA TCGAGCTGGC CAGCGGGGAC
TTCGCGCAGC GCCTGTTCTT CGGCCAGCCG CGCTCGGACG TGGCGAACGG CACCTGGGTG
TTCGACGGCA TGCCGCACCG GGTCATCGTG ATGGACCGGC TGCGCATGCC GCCCGCCACG
GGCCACGTCA CTGGCGAGAC GCGCAAGGGC GGCGATGCGG TCAACGCGCT GTTCGACCAG
ATGCCCGAGG ACACGGTGAT GTGCCTGACG GTCGTGGCGA CGCCGCAGGA CGTGCTCGAA
GCGCACCTGA ACCACCTGAG CAAGAAGTCG GTCGGCGAGA CGCTGGCCTC GGAGCAGACG
CGCCGCGACG TGCAGGAAGC GCGCGGCCTG ATCGGCAGCG CGCACAAGCT GTACCGCGGC
GCGCTGGCCT TCTACCTGCG CGGGCGCGAC CTCGCGCAGC TCGACGCCCG CGGCCTGCAA
CTGGTCAACG TCATGCTCAA CGCGGGCCTG CAGCCGGTGC GCGAGGAAGA CGAAGTGGCG
CCGCTCAACA GCTACCTGCG CTGGCTGCCG TGCGTGTTCG ATCCGGCCGC CGACAAGCGC
CAGTGGTACA CGCAACTGAT GTTCGCGCAG CACGCGGCGA ACCTCGCGCC CGTGTGGGGC
CGCAGCCAGG GAACCGGCAA TCCGGGCATC ACGTTCTTCA ACCGCGGCGG CGGGCCGATC
ACCTTCGACC CGCTGAACCG GCTCGACCGG CAGATGAACG CCCACCTGTT CCTGTTCGGC
CCCACCGGCT CGGGCAAGAG CGCCACGCTC AACAACATCC TGAACCAGGT GACGGCGATC
TACCGGCCGC GCCTGTTCAT CGTGGAGGCG GGCAACAGCT TCGGCTTGTT CGGCGACTTC
GCGGCGCGGC TGGGCATGAA GGTACATCGC ATCAAGCTCG CGCCCGGCGC CGGGGTAAGC
CTCGCTCCGT TCGCCGACGC CCACCGGTTG GTCGAAACGC CCAGCCAGGT GCAGACGCTG
GATGCCGACG CCCTGGACGA GGATCGCGAC GAGGCGGCAC AGGCAGCGGA TGCCGACGAG
CAGCGTGACG TGCTGGGCGA ACTGGAGATC ACCGCGCGGC TGATGATTAC CGGCGGCGAG
GACAAGGAAG AGGCGCGCAT GACGCGCGCC GACCGCAGCC TGATCCGCCA GTGCATCCTA
GATGCGGCTC AGCGTTGCGT GGCCGACCAG CGCACCGTCC TCACGCGCGA CGTGCGCGAT
GCGCTGCGCG AGCGCGCCCG CGACACGGCA CTGCCCGAGG TGCGGCGCGC GCGGCTGCTG
GAAATGGCCG ACGCGATGGA TATGTTCTGC CAGGGCGTGG ACGGCGAGAT GTTCGACCGG
CCCGGCACGC CCTGGCCCGA GGCCGACATC ACCATCGTCG ATCTGGCGAC CTTCGCACGC
GAGGGCTACA ACGCGCAGCT TTCCATCGCC TACATCAGCC TCATCAACAC GGTCAACAAC
ATCGCCGAGC GCGACCAGTT CCTCGGCCGC CCGATCATCA ACGTGACGGA CGAGGGGCAC
ATCATCACCA AGAACCCGCT GCTCGCGCCC TACGTCGTGA AGATCACGAA GATGTGGCGC
AAGCTCGGCG CCTGGTATTG GCTGGCGACG CAGAACATCG ACGACCTGCC CAAGGCCGCC
GAGCCCATGC TCAACATGAT CGAGTGGTGG ATCTGCCTCT CGATGCCACC GGACGAAGTG
GAGAAGATCG CGCGCTTCCG CGAGCTGAAC GCGGCGCAGA AGGCGCTGAT GCTGTCGGCC
CGCAAGGAGG CCGGCAAGTT CAGCGAGGGC GTGATCCTTT CCAAGAGCAT GGAAGTGCTG
TTCCGTGCGG TGCCGCCCAG CCTGTACCTG GCGCTGGCTC AGACCGAGCC GGAAGAGAAG
GCCGAGCGTT TCCAGTTGAT GCAGCAGTAC GGCATCGGCG AACTGGATGC CGCTTTCAAG
ATCGCCGAGA AGATCGACCG CGCCCGCAGC ATCGAGCCGC TGGCGCTCGA TGCGCTGGCG
TGA
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| Protein sequence | MAWSLPWARK VATPAGPSLE ADDAWSQHVS TLAAHGVPEP GSAVGGQPRR PATEADLQAL
YGVAPSFADL LPWVEYLPDS KSVLLEDGQS VAAFFELAPV GTEGREMAWL WQARDALENA
LQDSFDELDE NPWVVQLYAQ DEATWDNYLR GLTNYVRPRA QGSAFTDFYL RFFGHHLRAI
AKPGGLFEDT TVTRLPWRGQ VRRVRMVVYR RASASGASRR GQSPEQALTT ICDRLAGGLA
NAGVKARRME AHDIHDWLLR WFNPHPTMLG PAADDRECFY ALTRYPEEAE QGEIELASGD
FAQRLFFGQP RSDVANGTWV FDGMPHRVIV MDRLRMPPAT GHVTGETRKG GDAVNALFDQ
MPEDTVMCLT VVATPQDVLE AHLNHLSKKS VGETLASEQT RRDVQEARGL IGSAHKLYRG
ALAFYLRGRD LAQLDARGLQ LVNVMLNAGL QPVREEDEVA PLNSYLRWLP CVFDPAADKR
QWYTQLMFAQ HAANLAPVWG RSQGTGNPGI TFFNRGGGPI TFDPLNRLDR QMNAHLFLFG
PTGSGKSATL NNILNQVTAI YRPRLFIVEA GNSFGLFGDF AARLGMKVHR IKLAPGAGVS
LAPFADAHRL VETPSQVQTL DADALDEDRD EAAQAADADE QRDVLGELEI TARLMITGGE
DKEEARMTRA DRSLIRQCIL DAAQRCVADQ RTVLTRDVRD ALRERARDTA LPEVRRARLL
EMADAMDMFC QGVDGEMFDR PGTPWPEADI TIVDLATFAR EGYNAQLSIA YISLINTVNN
IAERDQFLGR PIINVTDEGH IITKNPLLAP YVVKITKMWR KLGAWYWLAT QNIDDLPKAA
EPMLNMIEWW ICLSMPPDEV EKIARFRELN AAQKALMLSA RKEAGKFSEG VILSKSMEVL
FRAVPPSLYL ALAQTEPEEK AERFQLMQQY GIGELDAAFK IAEKIDRARS IEPLALDALA
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