Gene Rpic12D_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0649 
Symbol 
ID8018275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp685295 
End bp686341 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content66% 
IMG OID644829424 
Productarsenical-resistance protein 
Protein accessionYP_002980622 
Protein GI241662262 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.045154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA GCAATCTCCC CCCCATCAGC GTCTTCGAGC GCTACCTGAG CGTATGGGTG 
CTGTTGTGCA TCGTCGTCGG CATCGCGCTC GGCCAGATGG CGCCGGGCAT CTTCCAGGCC
ATCGGCCGCA TGGAGGTGGC CCAGGTCAAC CTGCCGGTGG GCGGGCTGAT CTGGATCATG
ATCGTTCCGA TGCTGCTGAA GGTGGACTTC GGCGCACTAG GCCAGGTCAA GCAACACTGG
CGCGGCATCG GCGTGACCTT GTTCATCAAT TGGGCGGTCA AGCCGTTCTC GATGGCGCTG
CTGGCCTGGC TGTTCATCCG CCATGTGTTC GCCGACTGGC TGCCGGCCGA CCAGCTCGAC
AGCTACGTCG CCGGCCTGAT CCTGCTGGCC GCCGCGCCCT GCACGGCAAT GGTGTTCGTC
TGGAGCCGGC TGACCGGCGG CGACCCGGTG TTCACGCTCT CGCAGGTGGC CTTGAACGAC
ACCATCATGG TGTTCGCCTT CGCGCCCATC GTCGGCTTGC TGCTGGGCCT GTCGTCGATC
ACGGTGCCGT GGGCCACGCT GCTGGTATCG GTCGCGCTTT ACATCGTGAT CCCGGTCATC
CTCGCGCAGC TCTGGCGCCG GGCGTTGCTG CGCCGAGGCC AGGCCGCGTT CGACCGGATG
CTGGAGCGCA TCGGCCCGCT GTCGATCGCC GCGCTGCTGC TGACGCTGGT GCTGTTGTTC
GCCTTCCAGG GTGAGGCCAT CCTCCGGCAG CCGCTGGTGA TCGCCATGCT GGCGGTGCCG
ATCCTGATCC AGGTGTTTTT CAATTCCGGG CTGGCGTACT GGCTCAACCG CAAAGTGGGC
GAGAAGCACA ATATCGCTTG CCCCTCGGCG CTGATCGGCG CCAGCAACTT CTTTGAGCTG
GCCGTGGCCG CTGCCATCAG CCTGTTTGGA TTTCACTCCG GCGCCGCGCT GGCCACCGTG
GTCGGCGTGC TGATCGAGGT GCCGGTGATG CTGCTGGTGG TGCGCGTGGT CAACCGCTCG
CGCGGCTGGT ACGAGCACCA AGCGTGA
 
Protein sequence
MNRSNLPPIS VFERYLSVWV LLCIVVGIAL GQMAPGIFQA IGRMEVAQVN LPVGGLIWIM 
IVPMLLKVDF GALGQVKQHW RGIGVTLFIN WAVKPFSMAL LAWLFIRHVF ADWLPADQLD
SYVAGLILLA AAPCTAMVFV WSRLTGGDPV FTLSQVALND TIMVFAFAPI VGLLLGLSSI
TVPWATLLVS VALYIVIPVI LAQLWRRALL RRGQAAFDRM LERIGPLSIA ALLLTLVLLF
AFQGEAILRQ PLVIAMLAVP ILIQVFFNSG LAYWLNRKVG EKHNIACPSA LIGASNFFEL
AVAAAISLFG FHSGAALATV VGVLIEVPVM LLVVRVVNRS RGWYEHQA