Gene Rpic12D_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0587 
Symbol 
ID8018213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp622783 
End bp623832 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content57% 
IMG OID644829366 
ProductN-acylneuraminate-9-phosphate synthase 
Protein accessionYP_002980564 
Protein GI241662204 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03586] pseudaminic acid synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.518416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA ATATTGGTGG TCGCTTGGTC GGCCGCGAAC ACGAGCCGTT TCTGATCGCG 
GAAATGTCCG GTAATCACAA CCAGTCGCTG GGTCGCGCAC TGGAAATTGT TGATGCCGCA
GCCGCGTCAG GTGCACATGC GTTGAAAATC CAGACTTACA CAGCGGATAC CATGACACTG
GATATCCGCG AGCGCGAGTT TTTTATCTCA GACCCAAAGA GTTTATGGAA GGGAAAGTCT
CTTTACGAAC TCTATGACGA GGCTCACACC CCCTGGGAGT GGCATGCAGC AATTTTTGAA
AGGGCGCGCG GGCACGGCAT GATTCCGTTC AGCACGCCTT TCGACAACAC GGCGGTGGAT
TTTCTCGAGA GTCTCGATTC CGCCGTGTAC AAGATTGCTT CGTTCGAGAA CACGGATATC
CCTCTGATCC GCAAGGTTGC CCAGACCGGT AAGCCGATGA TTATCTCGAT CGGCATGGCA
AGTGTTGCGG AATTGGACCT GAGCGTTCGC GCTGCACGCG AGGCGGGCTG CAAGGATCTG
ATCCTGCTGA AATGCACCAG TACCTATCCG GCCTCGCCCG AGAATACGAA CATCCGTACC
ATCCCCCACA TGCGTGAATT GTTCGGATGT GAAGTGGGTC TGTCGGATCA CACTATGGGT
GTCGGCGTAT CTGTTGCCAG CGTGGCGATG GGGGCGACGG TGATTGAAAA GCACTTCACG
CTGAATCGCG CCGATGGCGG TGTGGATTCA ACGTTCTCGC TTGAGCCGGG TGAATTCAAG
TCGCTCGTCA CGGAGACGCG GCGTGCTTGG CAGGGGTTGG GGGCGGTTAG CTACGGCGCA
ACGGAGGCAG AGCAAAAGTC GCTCGTGTTT CGACGCTCGC TTTACATCAC CCGCGATCTT
AAGGCGGGGG AGTTGCTGGA CGCAACCAGC GTGCGGGCGA TTCGCCCAGG TTTTGGCCTT
GCGCCGCGGC ATCTCGATCA GGTACTCGGA CGTGCCGTAA AACTGGATGT CTGCCGTGGA
ACCCCCTTGG CGTGGGAACT GCTCGCCTGA
 
Protein sequence
MTINIGGRLV GREHEPFLIA EMSGNHNQSL GRALEIVDAA AASGAHALKI QTYTADTMTL 
DIREREFFIS DPKSLWKGKS LYELYDEAHT PWEWHAAIFE RARGHGMIPF STPFDNTAVD
FLESLDSAVY KIASFENTDI PLIRKVAQTG KPMIISIGMA SVAELDLSVR AAREAGCKDL
ILLKCTSTYP ASPENTNIRT IPHMRELFGC EVGLSDHTMG VGVSVASVAM GATVIEKHFT
LNRADGGVDS TFSLEPGEFK SLVTETRRAW QGLGAVSYGA TEAEQKSLVF RRSLYITRDL
KAGELLDATS VRAIRPGFGL APRHLDQVLG RAVKLDVCRG TPLAWELLA