| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0530 |
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| Symbol | |
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| ID | 8018156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 560872 |
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| End bp | 562167 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829309 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_002980507 |
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| Protein GI | 241662147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCC CGTCCAGCCT GTCGACCGGG CAATCCAAAG CCGCTGCGGT CTTCCGCGTC
ACCGCCGGGA ATTTCCTGGA GCAGTTCGAC TTCTTCCTGT TCGGCTTCTA CGCCACGCAG
ATCGCCAACG TCTTCTTTCC GACCGAAAGC GAGTTCGCCT CGCTGATGAT GACGTTCGCT
GTTTTTGGCG CCGGTTTTCT GATGCGACCG CTCGGCGCAG TCGTGCTCGG CGCCTACATT
GACGATGTCG GTCGCCGAAA AGGCCTGATC GTCACGCTGT CCATCATGGC AAGCGGGACG
GTGCTGATCG CGTTCGTTCC CGGCTACGCC ACGATCGGCC TGCTGGCCCC GGCGCTCGTG
TTGCTGGGGC GTCTCCTCCA GGGCTTCTCG GCCGGTGCGG AACTGGGCGG CGTATCGGTC
TATCTGGCCG AGATGGCCAC CCCGGGGCGC AAGGGCTTCT TCACGAGCTG GCAGTCCGCC
AGCCAGCAGG TCGCCATCGT CGTGGCGGCA GGTCTGGGCT TCGCGCTCAA CCAATGGCTG
AGCGCACCGG CCATCGCTGC CTGGGGATGG CGTGTGCCGT TCTTTGTCGG CTGCATGATC
GTGCCGTTCA TCTTCGTGCT GCGCCGCAAT CTTGAAGAAA CGCAGGAATT CAAGGCCCGC
AGGCACCGTC CGAGCATGAG GGAGGTGTTC GGCACGCTGC TGCAAAACTG GGGTGTCGTC
GTTGCCGGCA TGATGCTCGT GGCGATGACC ACGACGAGCT TCTACCTCAT CACCGTCTAT
GCGCCGACGT TCGGTAAAAC CGTCTTGCAT CTGAGCACGG CCGACAGCCT GCTCGTTACG
CTGTGCGTGG GGGTGTCCAA CTTCGTGTGG CTGCCGATTG GCGGTGCGCT TTCCGACAGG
ATCGGTCGGC GGCCGCTGCT CATCGGCATG ACGGTGCTCA CGATTGCAAC GGCATATCCG
GCGCTGTCAT TCCTCGCACA CACGCCGAGC TTCATGAACA TGCTGCTCGT GCTGCTGTGG
CTGTCGTTCA TGTACGGCAT CTACAACGGC GCGATGGTTG TCGCGCTCAC CGAAGTGATG
CCCGTGCAGG TGCGCGTTGC CGGATTCTCG CTCGCCTATA GCCTCGCGAC GGCAGTGTTT
GGCGGCTTTA CACCGGCCAT CTCGACAGCG GTCATTCATA TGACCGGCGA CAAGGCTGCC
CCCGGCTACT GGATGAGTTT TGCCGCAGTG TGCGCACTGT TGGCGACGTT GACGCTCTAT
CGCCGCCGTG CAGTGACGCT GGCGCCGGCG CACTGA
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| Protein sequence | MHPPSSLSTG QSKAAAVFRV TAGNFLEQFD FFLFGFYATQ IANVFFPTES EFASLMMTFA
VFGAGFLMRP LGAVVLGAYI DDVGRRKGLI VTLSIMASGT VLIAFVPGYA TIGLLAPALV
LLGRLLQGFS AGAELGGVSV YLAEMATPGR KGFFTSWQSA SQQVAIVVAA GLGFALNQWL
SAPAIAAWGW RVPFFVGCMI VPFIFVLRRN LEETQEFKAR RHRPSMREVF GTLLQNWGVV
VAGMMLVAMT TTSFYLITVY APTFGKTVLH LSTADSLLVT LCVGVSNFVW LPIGGALSDR
IGRRPLLIGM TVLTIATAYP ALSFLAHTPS FMNMLLVLLW LSFMYGIYNG AMVVALTEVM
PVQVRVAGFS LAYSLATAVF GGFTPAISTA VIHMTGDKAA PGYWMSFAAV CALLATLTLY
RRRAVTLAPA H
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