| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0487 |
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| Symbol | |
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| ID | 8018113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 511505 |
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| End bp | 513043 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829267 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_002980465 |
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| Protein GI | 241662105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.76423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA TTCGTCCGAC CCGTTTGCTC AACCTGTCGC GCAGCGCGCT CGCCTGCGCC
TTGCTCCTGA CCCTTGGTGC GTCGCCGCTG GCCCATGCCA AGAAGGCCAA GGCTCACGCG
GCACCGCGCA CCACCGCCGC ACAGGCACGC CAGGCGGCGC ACAACCCCGC TGGCTTGCCT
GCCAACGTGG CGCTGGCCTT TGCGCGCGCG CATATCCCGC TGGATGCGGT GAGCGTGTTC
GTGATCCGCA CCGGCACCGC CACGCCCATC CTGCAATGGA ACGCCGACAC CGGAATGAAC
CCGGCGTCGA CCATGAAACT GCTGACGACC TTCGCGGGGC TGGACCTGCT CGGCCCGGAT
TTTCGCTGGA AGACAACGGC CTATGCCGAC AGCGCTCCCG TCAACGGCAC GCTCAACGGC
AACCTGTACC TGCGTGGCCA GGGCGATCCA AAGCTGATTC CCGAAGAACT CGTCAAGCTG
GTGAGCGACG TGCGTCGCGC AGGCGTGGAT GAACTGGCCG GCAACATCGT GCTGGATCGC
ACCTACTTCG AGGGCGGCCT GTCGGAAGCT CCGCCGCTGG ACGGTGACAG CGCGCGTGCC
TACAACGTCG CGCCCGATGC GCTGCTGTAT TCCTTCAAGA CGCTCACGTT CACGCTCTCG
CCGGATGCCG GCAACGGCGC GGTCAACATC GATGTATCGC CGCCGCTGGC GCAGTTGCAG
ATCGACAACC AATTGCGCAC CACGCGCGGA GGCTGCGGCG ATTGGCAGAC CGCCTCCGGC
GCCAACATCT CCACGCAGAC CGACGGCCAT GTCATAGCCA GCTTCGGCGG CCGCTATGCC
GCGGCGTGCG GCGAACGCGT CTTCAATATC GCCGCGCTCA CGCATGCCGA CTTCATCTGG
GGTGGCTTCC TGGCGCTATG GCAACAGGCC GGTGGCACGA CGCGTTTCAC GCCGGGCTTG
CGCGAAGGCA AGGTACCGCG TCAGGCTGTT CTTCTGGCCA CGCACTACGG CCCGCCGCTG
TCGGAAGTCG TGCACGACAT CGACAAATAT TCGAACAACG TGATGGCGCG CCAGCTCTTC
CTCACCATCG GCGCGGAAAT CGGGCGCAAG CCCGCATCGG TGCGGCAATC GACCGAGGTC
ATCAACCGAT GGCTCGCCAA ACAGAACCTG ACGATGCCGG AGTTGGTGCT GGAGAATGGC
TCGGGCCTGT CGCGGATCGA GCGCATCAGC GCGCGCAACA TGGGGCGCCT GCTGCAGCAA
GCTGATGCCA ATCCGAACGG CGGCGTGCTG CGCGATGCGC TGCCTGTCGT CGGCGTGGAC
GGCACCATGC GTAATCGCCT GACACGGGCC GGGGTGGCCG GCAATGCCGA GATCAAGACC
GGCACACTCA ACGGCGTGCG CGCCATCGCC GGGTATGTGG AAGGCGAAGA CGGCCAGCGC
TTCGTGGTGG TCAGCATGAT CAACCACCCG AACGCCAGCG GCGGCCAAGC CGCGCACGAT
GCACTGCTGC AATGGATCTA CCAGGGCGCG CCGCGATGA
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| Protein sequence | MARIRPTRLL NLSRSALACA LLLTLGASPL AHAKKAKAHA APRTTAAQAR QAAHNPAGLP
ANVALAFARA HIPLDAVSVF VIRTGTATPI LQWNADTGMN PASTMKLLTT FAGLDLLGPD
FRWKTTAYAD SAPVNGTLNG NLYLRGQGDP KLIPEELVKL VSDVRRAGVD ELAGNIVLDR
TYFEGGLSEA PPLDGDSARA YNVAPDALLY SFKTLTFTLS PDAGNGAVNI DVSPPLAQLQ
IDNQLRTTRG GCGDWQTASG ANISTQTDGH VIASFGGRYA AACGERVFNI AALTHADFIW
GGFLALWQQA GGTTRFTPGL REGKVPRQAV LLATHYGPPL SEVVHDIDKY SNNVMARQLF
LTIGAEIGRK PASVRQSTEV INRWLAKQNL TMPELVLENG SGLSRIERIS ARNMGRLLQQ
ADANPNGGVL RDALPVVGVD GTMRNRLTRA GVAGNAEIKT GTLNGVRAIA GYVEGEDGQR
FVVVSMINHP NASGGQAAHD ALLQWIYQGA PR
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