| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0483 |
|---|
| Symbol | |
|---|
| ID | 8018109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 507178 |
|---|
| End bp | 508413 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829263 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_002980461 |
|---|
| Protein GI | 241662101 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.959429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.897973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ACCTGAACCC GCGCCTGGCG CAAGCCCACA CCGCGGAATC CCGCGCGCTG
AACGTTCCCA ACGCGATCCT GCCCGATGCC TGGCTTGGCA TGCTCGGCGG CGGCCAGCTC
GGCCGCATGT TCACGCACGC CGCGCAGGCC ATGGGCTATA AGGTCTGTGT GCTTGATCCG
GATCCGAACA GCCCGGCCGG CACCATCGCT GAGCGCCATC TGTGCGCCGG CTATACCGAC
GAAGCCGCAT TGGCTGAGAT GGCTGCACTG TGCCCGGCCG TCACCACCGA ATTCGAGAAC
GTGCCGGCGC AGGCGCTCGA TCGTCTGGAG CAACTCGGCG CGTTCGTGGC GCCGCGTGCC
AACTGCGTCT CGATCGCGCA GAACCGCATC GCCGAGAAAA AATTCTTCGC GCTGTGCGCC
GCACGCACGG GCATCCACCC CGCACCGAGC TGGGTGATCG AGCATGAAGC CGACATCGAA
CAACTGCCCG CCGACCTGCT GCCCGGCATC CTGAAGATTG CCCGCATGGG GTACGACGGA
AAGGGCCAGG CGCGTGTCTC GACGATTGAA GAGTTGCGCG CCGCCTGGGG CGCCATGCAG
CACGTGCCGT GCGTGCTGGA GAAGATGCTG CCGCTGGCCT ACGAGGTGTC TGTGCTGGCC
GCGCGCGGTG CCGATGGCAG CACGGCCACC TGGCCGCTGG CCGAGAACGT GCACCGTGAC
GGCATCCTGT TCTCAACGAT CATGCCGTCG CGCAGCGTGT CGGACGACAT TGCCACGCGC
ACCCGCGCCG CCGCCGCGAT GATCGCCGAA GAGATGGGCT ACGTCGGCGT GCTGTGCATC
GAGTTCTTCG TGCTGCAGGA CGGCTCGCTG GTCGCCAACG AAATGGCGCC GCGCCCGCAC
AACTCCGGTC ATATCACCAT GGATGTGTGC GAGACGAGCC AGTTCGAGCA ACAGGTGCGC
GCCATGGCCC GCCTGCCGCT AGGCAGCACG CGGCAGCACT CGCCGGGGCG CATGCTGAAT
GTGCTGGGCG ACGTGTGGTT TGAATACGGC CTGGAACGTA CGCCCGCGTG GCACGAAGTG
ATGGGCCACA GCGGTGCGAA GGTCCACCTG TATGGCAAGG CCGATGCGCG GCCGGGCCGC
AAGATGGGCC ACGTGAACTG CGTGGGCACT TCTGCTGAAG TGGTGGACGA AGCGTTCCGC
CACGCCGCAC AAGTGCTCGG CCTGCAGTCG GACTAA
|
|---|
| Protein sequence | MADDLNPRLA QAHTAESRAL NVPNAILPDA WLGMLGGGQL GRMFTHAAQA MGYKVCVLDP
DPNSPAGTIA ERHLCAGYTD EAALAEMAAL CPAVTTEFEN VPAQALDRLE QLGAFVAPRA
NCVSIAQNRI AEKKFFALCA ARTGIHPAPS WVIEHEADIE QLPADLLPGI LKIARMGYDG
KGQARVSTIE ELRAAWGAMQ HVPCVLEKML PLAYEVSVLA ARGADGSTAT WPLAENVHRD
GILFSTIMPS RSVSDDIATR TRAAAAMIAE EMGYVGVLCI EFFVLQDGSL VANEMAPRPH
NSGHITMDVC ETSQFEQQVR AMARLPLGST RQHSPGRMLN VLGDVWFEYG LERTPAWHEV
MGHSGAKVHL YGKADARPGR KMGHVNCVGT SAEVVDEAFR HAAQVLGLQS D
|
|---|
| |