| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0477 |
|---|
| Symbol | |
|---|
| ID | 8018103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 500706 |
|---|
| End bp | 501602 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829257 |
|---|
| Product | RarD protein, DMT superfamily transporter |
|---|
| Protein accession | YP_002980455 |
|---|
| Protein GI | 241662095 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00688] rarD protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.840744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGTT CCAACCGCAA CGGCGTGATC TTCGCGTTTC TGGCCTACAC CATGTGGGGC
CTCTTTCCGC TGTACTTCAA GCTGCTCAAG GCGGTGTCGC CGATCGAGAT TCTCTCGCAC
CGGGTGATCT GGTCATTGGC GGTGATGGTG GTGATCCTGC TCGTGAAGCG GCACGGCGCC
TGGTTGTGGG CGCTGCGCAA GCAACCGCGG GTGGTGGGGC GCTATGCCGC CAGCACCAGC
CTGTTGGCCG CCAACTGGCT GACCTACATC TGGGCCGTCA ACCACGACCA TGTGCTCGAA
GCCAGCCTGG GCTATTTCAT TAACCCGCTC GTGGTGGTGA TGCTCGCCGC GCTGGTGCTG
GGCGAGCGGC TGCGGCCGGT GCAGTGGGTG TCGGTGGCGC TGGCGGCAGC CGGCGTGGCG
TGGCTGACCT GGCAGGCCGG CACGCTGCCG TGGATTGCCC TGGCGCTGGC GTTCTCATTC
GGGCTCTACG GCCTGCTGCG CAAGACCTCG CCGCTGGGCG CGCTGGAAGG GCTGACGCTG
GAGACGTTGC TGCTGTTCCC GCTGGCGCTG GCCTATCTCG GCTGGCTGGC TTCGCAGCAT
CAGAACGCCT TCCTGGCCGC GTCGCCGGGC ACGCAGTGGC TGCTGGCGCT GGCCGGCCCG
CTGACGGCGC TGCCGCTGCT GCTGTTTGGC GCCGGCGCGC GGCGGATTCC GCTGTCGCTG
CTGGGTTTGC TGCAATACGT GAGCCCAACG CTGCAACTGC TGCTGGGCGT ATGGCTCTAC
AACGAGCCAT TTGCGGGGCC CAAGGTGGCG GGCTATGTGC TGATCTGGGC GGGTCTTGCC
GTGTATTCGG CCGAAAGCTG GATGCGCCTG CGGCGTCGTA CGCTGGTGCC GGCATAG
|
|---|
| Protein sequence | MSGSNRNGVI FAFLAYTMWG LFPLYFKLLK AVSPIEILSH RVIWSLAVMV VILLVKRHGA
WLWALRKQPR VVGRYAASTS LLAANWLTYI WAVNHDHVLE ASLGYFINPL VVVMLAALVL
GERLRPVQWV SVALAAAGVA WLTWQAGTLP WIALALAFSF GLYGLLRKTS PLGALEGLTL
ETLLLFPLAL AYLGWLASQH QNAFLAASPG TQWLLALAGP LTALPLLLFG AGARRIPLSL
LGLLQYVSPT LQLLLGVWLY NEPFAGPKVA GYVLIWAGLA VYSAESWMRL RRRTLVPA
|
|---|
| |