| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0467 |
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| Symbol | |
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| ID | 8018093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 492951 |
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| End bp | 493466 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644829247 |
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| Product | type 4 fimbrial pilin signal peptide protein |
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| Protein accession | YP_002980445 |
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| Protein GI | 241662085 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAA AGCGCCAAAT TAGTAACAAG GACCAAGCTG GCTTTACCCT GATCGAATTG
ATGATCGTTG TTGCCATCGT TGGAATTCTC GCGGCCTTTG CTATGCCGGC TTACCAGGAC
TACATGGGCC GTTCGCGCGT GGCGGAAGGG CTCGCGTTGG CTGCTGGTGC CAAGGCGATC
GTGGCGGAGA ACGCCATGGC AGGTGGGAGC GATCTCAGCC ATGGTTTTGC GCCTAATTCG
GTGGCCACGC GCAATGTAGT TGCGAATGGC GTCGAGGTGA ATCCAAAGAA CGGTGAAATC
AGTATTAAGT ACGCTAGCAA TGTTGCGAAA GAAGGCGCTA ATCTTCTGGT GCTGAAACCA
ACAGCAAACG GCATTGCTTT GGCGCAGAGT GAGCGTCCCA CTGGGCCGAT TCGCTGGGAT
TGCTATGTGG CGGATACGCC GAAGCGTACG GATATTGAGA AACCGGAAAC CGGGGGGACG
CTTCCCAAGA ATATCGCGCC GGCAGAATGC AGTTGA
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| Protein sequence | MHSKRQISNK DQAGFTLIEL MIVVAIVGIL AAFAMPAYQD YMGRSRVAEG LALAAGAKAI
VAENAMAGGS DLSHGFAPNS VATRNVVANG VEVNPKNGEI SIKYASNVAK EGANLLVLKP
TANGIALAQS ERPTGPIRWD CYVADTPKRT DIEKPETGGT LPKNIAPAEC S
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