Gene Rpic12D_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0446 
Symbol 
ID8018071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp470785 
End bp471741 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content64% 
IMG OID644829225 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002980424 
Protein GI241662064 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.2537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TCGTTCTTGG CGTCATCGCG CTTGCCATCC TCGCGCCTGT TGCGTTCACG 
TTTTTCATCG CTCGCCGCGT CAACAAGGGG TTCCCGCCCG AAGGTCAGTT CATTGATATC
GGCGGCGATC GCGTGCATTA CACCGATCGC GGAACGGGCC CTGCCATCGT GTTCGTTCAT
GGCCTGTGCG GCAACCTGCG CAACTTCGCG TACCTGGATA TGGACCGGCT GGCGCGCTCG
CACCGCGTGA TCGTGATCGA CCGACCGGGG GCAGGGCGAT CCGTGCGCGC TGCGGATTCG
CCGGCAAACA TCTACGCGCA GGCCCACACG GTCGCGCAGT GCATCGAGCA GCTTGGGCTC
GACAAGCCCG TGCTGGTGGG GCATTCGCTT GGTGGGGCGA TTTCGCTTGC GGTGGGGCTG
AACCATCCGC ACGTTATCCG CCGGCTCGCG TTGATTGCGC CGCTCACGCA TGCAGAAAGC
ACGCCGCCGG GTGCGTTCAG GGGCTTGGTG TTGACGTCGC CGCTGGTTCG CAGGCTGGTG
TCATGGACAC TGGCGATCCC GCTGTCGATC ATCAATTCCC GCAAGGCCAT CGCTGCGGTG
TTCGCGCCCG AGGCCATGCC GAAGGATTTC CCGTTCAAGG GCGGCGGCTT GCTTGGGCTG
CGTCCGCATG TGTTTTATGC GGCTTCGTCG GATCTGGTCG CTGCGCCGGA AGATCTGCCC
GACATGGAAC GCCGCTATGC CTCGATGACG GTGCCCGTCG ATGTGCTGTA CGGCCGCGGT
GACCGCATCC TCAACGTCAA ACGTCAGGGC GAAGCGCTCA AGCAGAAGCT CGATCGTGTG
AACCTGCGCA TCATCGACGG CGGCCATATG CTGCCCGTGA CGCAACCGGC GTTGACGACC
GATTGGGTGT TGGCGGTGGC CGCTGCGGCG CCGGCGCAAG CAGAATTGCT TGCGTAA
 
Protein sequence
MTSIVLGVIA LAILAPVAFT FFIARRVNKG FPPEGQFIDI GGDRVHYTDR GTGPAIVFVH 
GLCGNLRNFA YLDMDRLARS HRVIVIDRPG AGRSVRAADS PANIYAQAHT VAQCIEQLGL
DKPVLVGHSL GGAISLAVGL NHPHVIRRLA LIAPLTHAES TPPGAFRGLV LTSPLVRRLV
SWTLAIPLSI INSRKAIAAV FAPEAMPKDF PFKGGGLLGL RPHVFYAASS DLVAAPEDLP
DMERRYASMT VPVDVLYGRG DRILNVKRQG EALKQKLDRV NLRIIDGGHM LPVTQPALTT
DWVLAVAAAA PAQAELLA