Gene Rpic12D_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0439 
Symbol 
ID8018064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp463362 
End bp463694 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID644829218 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002980417 
Protein GI241662057 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.395009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGGG TTTCTCTTTC TCTGGGCGAG GCCGGCGTGC CGTTTTTCAA TCTCAATGCA 
GAGGCCGAAG CGCTGCCGCG CGCATGGTCG TCTCGCGTGC TGGAGCGTTT TGGTAGCGCC
AATTTCAAGG TGCTGCGCAT GGATGGCACG TCGTATCCCA ACGAGGTGCA CGACTATGCC
GAAGGGCTGC TGGTCATCGA TGGGCAACTG CGCCTGCGCA CCGGCGACGA AGCGGTGACG
GTCTCGCGCG GCGAGCTGTA TGTGGTGCCT GCCGGCGTGC CGCACAGCGT AGATGCCGGC
AGCGCCGGCA CGCTGGTTAT TCTGGACGTG TAA
 
Protein sequence
MLGVSLSLGE AGVPFFNLNA EAEALPRAWS SRVLERFGSA NFKVLRMDGT SYPNEVHDYA 
EGLLVIDGQL RLRTGDEAVT VSRGELYVVP AGVPHSVDAG SAGTLVILDV