Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0439 |
Symbol | |
ID | 8018064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 463362 |
End bp | 463694 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829218 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_002980417 |
Protein GI | 241662057 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.395009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGGG TTTCTCTTTC TCTGGGCGAG GCCGGCGTGC CGTTTTTCAA TCTCAATGCA GAGGCCGAAG CGCTGCCGCG CGCATGGTCG TCTCGCGTGC TGGAGCGTTT TGGTAGCGCC AATTTCAAGG TGCTGCGCAT GGATGGCACG TCGTATCCCA ACGAGGTGCA CGACTATGCC GAAGGGCTGC TGGTCATCGA TGGGCAACTG CGCCTGCGCA CCGGCGACGA AGCGGTGACG GTCTCGCGCG GCGAGCTGTA TGTGGTGCCT GCCGGCGTGC CGCACAGCGT AGATGCCGGC AGCGCCGGCA CGCTGGTTAT TCTGGACGTG TAA
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Protein sequence | MLGVSLSLGE AGVPFFNLNA EAEALPRAWS SRVLERFGSA NFKVLRMDGT SYPNEVHDYA EGLLVIDGQL RLRTGDEAVT VSRGELYVVP AGVPHSVDAG SAGTLVILDV
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