Gene Rpic12D_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0365 
Symbol 
ID8017989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp381473 
End bp382672 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID644829144 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002980343 
Protein GI241661983 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC AACTGCAAGA CGCCTACATC GTCGCCGCGA CGCGTTCCCC GATCGGCAAG 
GCGCCGAAGG GCACGCTCAA GAACCTGCGC CCGGACGATC TGCTGGCGAC CATCCTCAAG
AGCGCTGTCG CACAGGTGCC GAACCTGGAC CCGGCGTTGA TCGAAGACGC CATTGTTGGC
TGCGCGATCC CGGAAGCGCA GCAGGGCCTG AACGTGGCGC GTATCGGTGC GCTGCTGGCC
GGCTTGCCGA ACACGGTGGG CGGCGTCACC GTCAACCGTT TCTGCGCCTC GGGCCTGACC
GCCGTGGCAA TGGCCGCCGA CCGCATCCGC GTGGGCGAAT CCGACGTGAT GATCGCCGCC
GGTGTCGAAT CGATGAGCAT GGTGCCGATG ATGGGCAACT CGCCGTCGAT GTCGCCAGAC
ATCTTCACGC GGGACGAGAA CGTCGGCATC GCCTACGGCA TGGGCCTGAC CGCCGAGAAG
GTCGCCCAGC AATGGAAGAT CTCGCGCGAG GCGCAGGACG CTTTCTCGCT GGCTTCGCAC
CAGAAGGCGC TGGCCGCGCA GCAAGCCGGC GAGTTCAAGG ACGAGATCAC CCCGATCGAG
ATCATCGAGA AGTTCCCGAA CCTGGGTACG GGCGCGATCG ACATCAAGAC CCGCACGATG
TCGCTGGATG AAGGCCCGCG TGCCGATACG TCGGTCGAAG GTCTGGGCAA GCTGCGCGCC
GTGTTCGCCA ACAAGGGCAG CGTGACGGCC GGCAACAGCT CCCAGACGTC GGACGGTTCG
GGCGCGTTGA TCCTGGTGTC GGAGAAGATC CTGAAGCAGT TCAACCTGGT GCCGCTGGCG
CGCTTCGTAT CGTTTGCGGT GCGCGGCGTG CCGCCGGAGA TCATGGGGAT CGGCCCGAAG
GAAGCGATTC CGGCCGCGCT GAAGGCGGGC GGCCTGACGC AGGACCAGAT CGACTGGATC
GAACTGAACG AGGCGTTTGC CGCGCAGTCG CTCGCCGTGA TCCAGGACCT GGGCCTGGAC
ACCAGCAAGA TCAACCCGCT GGGCGGCGCG ATCGCGCTCG GCCACCCGCT GGGCGCCACC
GGTGCCATTC GTGCGGCCAC GGTGGTGCAC GGCCTGCGCC GTCGCAACCA GAAGTACGGC
ATGGTGACGA TGTGCGTCGG CACCGGCATG GGCGCTGCGG GCATTTTCGA ACGCATGTGA
 
Protein sequence
MTKQLQDAYI VAATRSPIGK APKGTLKNLR PDDLLATILK SAVAQVPNLD PALIEDAIVG 
CAIPEAQQGL NVARIGALLA GLPNTVGGVT VNRFCASGLT AVAMAADRIR VGESDVMIAA
GVESMSMVPM MGNSPSMSPD IFTRDENVGI AYGMGLTAEK VAQQWKISRE AQDAFSLASH
QKALAAQQAG EFKDEITPIE IIEKFPNLGT GAIDIKTRTM SLDEGPRADT SVEGLGKLRA
VFANKGSVTA GNSSQTSDGS GALILVSEKI LKQFNLVPLA RFVSFAVRGV PPEIMGIGPK
EAIPAALKAG GLTQDQIDWI ELNEAFAAQS LAVIQDLGLD TSKINPLGGA IALGHPLGAT
GAIRAATVVH GLRRRNQKYG MVTMCVGTGM GAAGIFERM