Gene Rpic12D_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0323 
Symbol 
ID8017947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp333313 
End bp334083 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID644829102 
Productglycosyl transferase family 2 
Protein accessionYP_002980301 
Protein GI241661941 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGA CCGGCGCTTC CACTTCGCAC CTCGTTCTGA TTCCAAGCTA CAACCCTGGC 
CCCAAGGTTG ACGACACCGT GCGCAGTGCG CGCGCACAGT GGAACCCGGT CTGGGTGGTG
GTGGACGGCA GTACCGACGG CAGCACCGAA CGCTTGCAGG CCATGGCCGA GCAAGACCCG
GGGCTGCGGG TGATCGTGCT GCCGCGCAAT CGCGGCAAGG GCGTGGCCGT ACTGGCTGGT
CTGGAGGCCG CTGCGGCAGC AGGCTTTACC TACGTGCTGA CCATGGACGC CGATGGGCAG
CATCCTGCCA ACCTGATCCC CGAATTCATG GCTGCCTCGC AGGCGGCGCC CGACGCGATG
ATCCTCGGCC AGCCGGTGTT CGACGCAACG GCGCCGCAGA TGCGTGTGCA GGGCCGGCGC
CTGTCCAATG GCTGCGCGGA CATCGAGACC CTGTGGGCTG GAATTGGCGA TACGCTGTTC
GGCTTTCGCG TTTATCCAAT TGCACCGCTG GCCGAGATCA TGCGCCGGCA GAGCTGGATG
CGCGGTTTCG ATTTCGACCC GGAAGCGGCA GTGCGCCTGT GCTGGGCCGG CGTACGTCCG
ATCCGGCTGG CGGCGCCGGT GCGTTACTTC CGCCCGAACG AGGGCGGCGT GTCGCATTTC
CGGTATCTGC GTGACAACAT CCTGCTGATC GCGATGCATC TGCGCTTGGC GGCTGAGGGC
TTGCTGCGCT TGCCCTCGAT GATCGCGCGA CGCCTGCAGC GCGGTTGGTA G
 
Protein sequence
MPMTGASTSH LVLIPSYNPG PKVDDTVRSA RAQWNPVWVV VDGSTDGSTE RLQAMAEQDP 
GLRVIVLPRN RGKGVAVLAG LEAAAAAGFT YVLTMDADGQ HPANLIPEFM AASQAAPDAM
ILGQPVFDAT APQMRVQGRR LSNGCADIET LWAGIGDTLF GFRVYPIAPL AEIMRRQSWM
RGFDFDPEAA VRLCWAGVRP IRLAAPVRYF RPNEGGVSHF RYLRDNILLI AMHLRLAAEG
LLRLPSMIAR RLQRGW