Gene Rpic12D_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0313 
Symbol 
ID8017937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp322793 
End bp323254 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID644829092 
Producthypothetical protein 
Protein accessionYP_002980291 
Protein GI241661931 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.079417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA GCGCGCAGCC AACCCCGCCG CTCGATCGCG ACTGGATTGC GGCACGCATT 
CCGCACAGCG GCGCGATGTG TCTGCTCGAC GCTGTCATCG CCTGGGACGA AGCACACATC
TATTGCAGCG CCACGAGCCA TCGTGACATT GCCAACCCGC TGCGTTCGCA CGGTCAATTG
GCCGCCGTCT GTGGCATCGA ATACGCCGCT CAGGCGATGG CCGTGCATGG CGCCCTGTGC
GATGCTGCGC AAGCACGTCC GCGCGCCGGC TTTCTCGCCA GTGTGCGCAG CATTGAGGCA
CACGTACCGC GCCTCGACAC AATCGAGACG CCGCTCGACG TCGAAGCCGA ACGCATCGGC
GGCGACGGCA TCAACGTGCT GTACCGCTTT ACCGTGCGCA GTGGCGCACG CATCCTGTTG
ACCGGTCGCG CCGCCGTGGT GCTCGACGCG ACCGTTGCAT GA
 
Protein sequence
MTSSAQPTPP LDRDWIAARI PHSGAMCLLD AVIAWDEAHI YCSATSHRDI ANPLRSHGQL 
AAVCGIEYAA QAMAVHGALC DAAQARPRAG FLASVRSIEA HVPRLDTIET PLDVEAERIG
GDGINVLYRF TVRSGARILL TGRAAVVLDA TVA