Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0257 |
Symbol | |
ID | 8017880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 268970 |
End bp | 269821 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829036 |
Product | nitrate ABC transporter, inner membrane subunit |
Protein accession | YP_002980236 |
Protein GI | 241661876 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.738144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC TCGTCAAGAC GTTGTCTGGC GTGCAGTCCG ACGCCGCCCC TGAGCATCGC CGGTTCGTTG CACGCGACTG GTTTGTCGCT GCCGTGGTGC GCGGCTTTCC GCCCGTTCTG GGCTTGGTGC TGTTCGTGCT GGCGTGGCAG GGCATTGCCA CGGCCATCCC CGCATTGCCG ACACCGGCAG TGACGTGGAA AGCAGCAGTC GCCTTGTTCG CCGATCCGTT CTATCGCAAT GGCCCGAATG ACCAGGGTGT GGGCTGGAAC GTGCTCGCTT CGCTGGCGCG CGTGGGTGCG GGCTTCGGCA TGGCTGCAGT CATCGGCATT CCGGCGGGCT TCCTGATCGG GCGTTTTGCG TTTCTCAACG CGATGGCCTC GCCCATCATC AGCCTGCTGC GGCCCGTGTC GCCGCTGGCG TGGCTGCCGA TCGGGCTGCT GCTGTTCAAA TCGGCCAACC CGGCGGCCAT CTGGGCGATC TTCATCTGCT CGATCTGGCC GATGGTCATC AACACCGCCG TGGGCGTGAC GCGCGTGCCG CAGGACTACC TGAACGTGGC CCGTGTGCTG AATCTCTCCG AATGGAAGGT GTTCACGCGC GTGCTGTTTC CCGCCGTGCT GCCGTACATG CTGACGGGTG TGCGATTGTC CATCGGCACG GCATGGCTGG TGATCGTAGC GGCGGAGATG CTCACGGGCG GCGTCGGCAT CGGCTTCTGG CTGTGGGACG AGTGGAACAA CCTGAAGGTC GAGCACATCG TCATCGCCAT CTTCGTGATT GGTGTGGTGG GCTTGCTGCT CGAGCACGCG CTGCTGGCGA TTGCGCGGCG CTTCTCGTAC GACGCGGTTT GA
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Protein sequence | MNTLVKTLSG VQSDAAPEHR RFVARDWFVA AVVRGFPPVL GLVLFVLAWQ GIATAIPALP TPAVTWKAAV ALFADPFYRN GPNDQGVGWN VLASLARVGA GFGMAAVIGI PAGFLIGRFA FLNAMASPII SLLRPVSPLA WLPIGLLLFK SANPAAIWAI FICSIWPMVI NTAVGVTRVP QDYLNVARVL NLSEWKVFTR VLFPAVLPYM LTGVRLSIGT AWLVIVAAEM LTGGVGIGFW LWDEWNNLKV EHIVIAIFVI GVVGLLLEHA LLAIARRFSY DAV
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