Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0253 |
Symbol | |
ID | 8017876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 263708 |
End bp | 264718 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644829033 |
Product | glycosyl transferase family protein |
Protein accession | YP_002980233 |
Protein GI | 241661873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.186746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCTC CCCCCATCCT CCCCGCCACC GCGACTGAAG ACGCCTTCGC CAATGGCCCC TTCCCCGCTG CCCGCTTCAT CAAAGAAATC GGCCGCGGCG CAGACGGCGC TCGCGCGCTG GTCAAGCACG ATGCCCGCGC GCTCTTCACC GCCATGCTGG AAAGCCGCAT CTCCGACGTG CAGCTCGGCG CCATCCTCAT GGCCTACCGC ATCAAGGGGG AGACCCCGGA AGAACTCGAC GGCATGCTGG AAGCCACGCA TGCGCATTGC CGGCCGCTGC CGGCCCCGAA CACGCCGGAG CTCGCGCTGC CGGTCGTCAT CCCCAGCTAC AACGGCGCCC GCCGCCAGCC GAACCTGGTA CCGCTGCTGG CCAAGCTGCT GGCGCGCGAG GGTGTGCCGG TGCTGGTGCA TGGCATCCGC CGCTTCGACG GCCGCGTCAC CACGGCTGCG CTGTTCGAAG CGCTCGGCTG GCCCCTCTGC GAACACATGG ACGACGCCCG CGAGCGCCTG GAGCGCGATC GCCTGGCCTA TGTGCCGATC GACGTGCTCT CGCCCCAGCT AACCTCGCTC TTGGACAAGC GCGAGATCGT CGGCCTGCGC AATTCGGCCC ACACAGTGGT GAAGATGCTG CAGCCCATTG GTGGGCACGC GCCCCACGAG GCGCTACGGC TGGTCAGCTA CACGCACCCG GAATACCGCG ACACGCTCAC CGATTACTTC CTGCGCCACC CGGCCAATGT GCTGCTGGCA CGCGGCACCG AAGGCGAGGC GGTGGCCGAT GCTCGGCGCG GCAGCGCGGT GGAGTGGCTG CACGACGGCT CGCATGAGAC GGTGATCGAA GCGGTGGAAG GTTCGAGCGA CGCACCGCCT GAGCTGCCCG CAGGAACGGA CGTGGCAGCA ACGGCACGGT GGATTGAGGC GGTGCTCGAA GGCAGGCAGC CGGTGCCGGA GCCGATCGCC AAGCAGGTCC GCGCGATCGT GCGGTGTGCA CGACCGGCGC AGGCTGCCTG A
|
Protein sequence | MPAPPILPAT ATEDAFANGP FPAARFIKEI GRGADGARAL VKHDARALFT AMLESRISDV QLGAILMAYR IKGETPEELD GMLEATHAHC RPLPAPNTPE LALPVVIPSY NGARRQPNLV PLLAKLLARE GVPVLVHGIR RFDGRVTTAA LFEALGWPLC EHMDDARERL ERDRLAYVPI DVLSPQLTSL LDKREIVGLR NSAHTVVKML QPIGGHAPHE ALRLVSYTHP EYRDTLTDYF LRHPANVLLA RGTEGEAVAD ARRGSAVEWL HDGSHETVIE AVEGSSDAPP ELPAGTDVAA TARWIEAVLE GRQPVPEPIA KQVRAIVRCA RPAQAA
|
| |