Gene Rpic12D_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0113 
Symbol 
ID8017736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp121381 
End bp123000 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content68% 
IMG OID644828895 
Productcarboxyl transferase 
Protein accessionYP_002980095 
Protein GI241661735 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.495482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGC TTGAATCGCG CATCGTGCCG CAGAGCGACG CATATCGGCA GAACCATGCT 
GCGCTCACGG AACTCGTCGG CCGGTTGCGC ACGCTGGAAG ACCGCACACG CGACAAGTCC
GAAGCCTCGC GCGCGCGCTT CGCGCAGCGC GGGCAACTGC TGCCGCGCGA TCGGCTGGGC
CGCCTGCTCG ATGCCGGCGC GCCGTTTCTT GAGCTATCCA CGCTGGCGGG CTTTTGCCTC
GACCACGCAG ACCCGGCGCG CTCGATTCCT GGCGGCGGCT TCATCGCGGG CATCGGCTGG
GTGAGCGGTG TGCGCGCGAT GATCATTGTC GACGACGCGG GCATCGACGC AGGGGCCGTG
CAGCCGATGG GCATCGAGAA GTTCCAGCGT GCCCAGGCCA TTGCGCTGGA GCAGAAGCTG
CCGTTCATCC ACCTTGTCGA ATCGGCCGGC GCCAACCTGC TGACGTATCG CGTGGAGACC
TTCATCCACG GCGGCAGCGG CTTTTACTGG CTCGCGCGGC TGTCGGCGGC GGGCATTCCG
GTGATCAGCG TGGTGCATGG GTCCAGCACG GCGGGCGGCG CCTACATGCC GGGCCTGTCG
GACTACGTGG TGATGGTGCG CGACCGGGCG CGCGCGTTCC TCGCCGGCCC GCCGCTGCTG
AAAGCGGCCA CGGGCGAGAT CGCCACCGAA GAGGAACTGG GCGGCGCCGA GATGCACGCC
ACCACTTCGG GCCTGGCCGA ATACCTGGCG GAAGACGATG CCGACGCGCT GCGCATCGCG
CGCGAAGTTG TTGCCGCGCT CGACTGGAAC CGCGATGTGC CGGCACCGGA CAGACCATAC
GCGCCGCCGC GCTTTGATGC GGAAGAACTG CTTGGCATTG CGCTCACCGA TCATCGCAAA
CCGCTCGACA TGCGCGAGGT GATTGCACGC ATTGCCGATG GGTCGGACTT CCTGGAATTC
AAGCGCGACT ACGGCTCCGG CACCGTCACC GGGCACGCGG CCATCTGCGG CATGCGCGTC
GGCGTCATCA CGAACAACGG GCCGCTGGAC CCGGCGGGCG CGACCAAGGT GGTGCACTTT
ATCCAGGCCT GCTGCCAGTC CGATACGCCG CTGCTGTATC TGCAAAACAC CACCGGCTTC
ATCGTCGGCA AGGCGTCGGA GCAGGCCGGC ATGATCAAGC ACGGCTCGAA AATGATCCAG
GCCATGGCCA ATGCCACCGT GCCGCGCATC ACCGTGCATT GCGGTGCGTC GTTCGGGGCG
GGCAACTACG GCATGTCGGG GCGCGGCTTC TTTCCGGATT TCTGCTTCGG CTGGCCCAAC
GCCAAGACGG CCGTGATGGG CGCCGAGCAG GCCGCCGGCA CGATGGCGAC CGTCATGGCC
GCGAGCATGC AACGCAAGAC GCAGACCGTC GACCACGACG CCATCGAGGC GATGCGCGCC
AAGGTCATCG ACACGTTCGA GCGGCAGTCC GACGCGTTCA CCATTTCGGG GCGGCTGCTG
GACGACGGCG TGATCGACCC GCGCGACACA CGCAAGGTGC TCGCCTGCGT GCTCGGGGTG
TGCGACGAAG CGCGCAGGCG AACGCTGCAT CCGATCCAGT TTGGCGTTGC GCGCCCGTAG
 
Protein sequence
MPALESRIVP QSDAYRQNHA ALTELVGRLR TLEDRTRDKS EASRARFAQR GQLLPRDRLG 
RLLDAGAPFL ELSTLAGFCL DHADPARSIP GGGFIAGIGW VSGVRAMIIV DDAGIDAGAV
QPMGIEKFQR AQAIALEQKL PFIHLVESAG ANLLTYRVET FIHGGSGFYW LARLSAAGIP
VISVVHGSST AGGAYMPGLS DYVVMVRDRA RAFLAGPPLL KAATGEIATE EELGGAEMHA
TTSGLAEYLA EDDADALRIA REVVAALDWN RDVPAPDRPY APPRFDAEEL LGIALTDHRK
PLDMREVIAR IADGSDFLEF KRDYGSGTVT GHAAICGMRV GVITNNGPLD PAGATKVVHF
IQACCQSDTP LLYLQNTTGF IVGKASEQAG MIKHGSKMIQ AMANATVPRI TVHCGASFGA
GNYGMSGRGF FPDFCFGWPN AKTAVMGAEQ AAGTMATVMA ASMQRKTQTV DHDAIEAMRA
KVIDTFERQS DAFTISGRLL DDGVIDPRDT RKVLACVLGV CDEARRRTLH PIQFGVARP